Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq15676 289 5e-76 >seq15676 Length=1149 Score = 289 bits (320), Expect = 5e-76 Identities = 228/273 (84%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||| ||||| | | |||||| || ||||||||||||||||||| Sbjct 808 CCCACGCTTTCGCACCTCAGTGTCAGATGCAGTCCAGTAAGCCGCCTTCGCCACTGGTGT 749 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||||||||||||||||||||||||| |||||||| || ||||||| || | Sbjct 748 TCCTCCTAATATCTACGCATTTCACCGCTACACTAGGAATTCCACTTACCTCTCCTGCTC 689 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| | |||||||| |||| | || ||| ||| || | ||||||||| |||| Sbjct 688 TCAAGTTAGACAGTTTCCAATGACCTTTTTGCGTTAAGCACAAAAATTTCACATCAGACT 629 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | || || ||| | |||||||||| |||||||| ||||||||||||| | ||||||| Sbjct 628 TATCTAACCACCTGCGCGCCCTTTACGCCCAATAATTCCGGATAACGCTCGGGACCTACG 569 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGT 273 ||||||||||||||||||||||||||||||||| Sbjct 568 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGT 536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828672371016