Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq15676 242 9e-62 >seq15676 Length=1149 Score = 242 bits (268), Expect = 9e-62 Identities = 306/411 (74%), Gaps = 12/411 (3%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||| ||||| | |||||| |||||||||| |||||||||||||| |||||||| Sbjct 465 TTTACATTCCGAAAAACGTCTTCACTCACGCGGCATTGCTGCATCAGGCTTTCGCCCATT 406 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 |||||| |||||| ||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 405 GTGCAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 346 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| ||||| |||||||| || |||| ||||||||||| |||| || ||||| | ||| Sbjct 345 GGCCGGTCAACCTCTCAGTCCGGCTACCGATCGTCGCCTTGGTGCGCTCTTACCACACCA 286 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | || | | | || | | | || || | |||| Sbjct 285 ACTAGCTAATCAGA-CGCAGTCCCTTCCATTG-GTGGAGCTTTTTGG----CTCCTTTTA 232 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| |||||||||| |||||||| ||| |||| ||| | | | Sbjct 231 AATTGCTTC-TTATCCGGTATTAGCTTTCGTTTCCAAAAGTTGTCCCAGTCCTTTGGTTA 173 Query 305 -GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 ||| | | |||||||||||| ||||||| | | | | |||||| | || Sbjct 172 GGTTAACTACGTGTTACTCACCCGTTCGCCACT-GATTGTG-TGATGCAAGCATCACACT 115 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | ||||||||||||||||| |||||| ||||||||||||| | ||||| Sbjct 114 CT--CCGTTCGACTTGCATGTATTAGGCATGCCGCCAGCGTTTATCCTGAG 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222205687296