Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq15676 405 1e-110 >seq15676 Length=1149 Score = 405 bits (448), Expect = 1e-110 Identities = 324/390 (83%), Gaps = 4/390 (1%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 537 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTATCCGGAATTA 596 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 ||||||||||||| ||| |||||||| |||||| || |||||| | ||| ||| Sbjct 597 TTGGGCGTAAAGGGCGCGCAGGTGGTTAGATAAGTCTGATGTGAAATTTTTGTGCTTAAC 656 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198 | | | || ||||||| || ||| ||||||| || ||||||||||||||| Sbjct 657 GCAAAAAGGTCATTGGAAACTGTCTAACTTGAGAGCAGGAGAGGTAAGTGGAATTCCTAG 716 Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGA 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 717 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTACTGGA 776 Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 ||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 777 CTGCATCTGACACTGAGGTGCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAG 836 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGC 378 ||||||||||||||||||| | ||| |||| | || || | | | |||| | || Sbjct 837 TCCACGCCGTAAACGATGAGTGCTAAGTGTTGCGGGTCAAA----CCGCAGTGCTGAAGT 892 Query 379 AAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||||||||||| | ||| ||||||||||| Sbjct 893 TAACGCAATAAGCACTCCGCCTGGGGAGTA 922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203008739328