Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq7622 201 4e-49 >seq7622 Length=2935 Score = 201 bits (222), Expect = 4e-49 Identities = 342/487 (70%), Gaps = 13/487 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 |||||| || ||||||| ||| ||| ||||||||||||||| |||| ||| || Sbjct 1286 CGAGTCTTAATAGGGCGAAGAAAGTATGTGGCTGTAGACCCGAAACCGTGTGAGCTAGCC 1227 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||| |||| ||||| ||||| || | |||||| ||||||| | |||||||| Sbjct 1226 ATGAGCAGGTTGAAGCGTAGGTAAAACTACGTGGAGGACCGAACCAGTGTACGTTGAAAA 1167 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | |||||| ||||| ||||||||||| | || | ||| ||| ||||||||||| Sbjct 1166 GTGCTTGGATGACTTGTGGCTAGGGGTGAAATTCCAATCGAACACGGATATAGCTGGTTC 1107 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA--CCATCGGGGGTAGAGCACTGTT 236 ||||||||| |||||| |||| | | | | | || |||||||||||||| Sbjct 1106 TCTCCGAAATAGCTTTAGGGCTAGCCTTGATAAAAAGTCTACTGGAGGTAGAGCACTGTT 1047 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTG-CAAACTCCGAATGC--GCATCAG 293 | | | || |||| | ||| || ||| | |||||||||||||| | || || Sbjct 1046 TTTGTGATGGCCTCATCAAGGGGTACTGAA-CATAGACAAACTCCGAATGCCAGAAT-AG 989 Query 294 TTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCG 353 | | | ||||| || ||||||| |||||||| | | | ||| |||| || Sbjct 988 ATGTTAATCAGGAGTCAGACTATGGGTGATAAGGTCCATAGTCAAAAGGGAAAGAGCCCA 929 Query 354 GACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413 ||| | ||||||||| ||| |||| | ||||| | || ||||| ||| | Sbjct 928 GACCACCAGCTAAGGTCCCTAAATATACGTTAAGTGGGA--AAGGAAGTAAAGATGCATA 871 Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 |||| | |||| |||||||| |||||||||| || |||||||||||||||| ||| |||| Sbjct 870 GACAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAGTGCGTAATAGCCCACT 812 Query 474 AGTCGAG 480 |||||| Sbjct 811 GGTCGAG 805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689331421184