Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq15676 145 2e-32 >seq15676 Length=1149 Score = 145 bits (160), Expect = 2e-32 Identities = 215/301 (71%), Gaps = 14/301 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACA-------TACAAGC--T 51 ||||||||||||| ||||||||| ||| ||||| ||||| || |||| | Sbjct 559 GGCTGCTGGCACGTAGTTAGCCGTCCCTTTCTCATATGGTACCGTCACAGTAAAAGCATT 500 Query 52 CCCACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111 || | | | | || ||||| ||||| ||| |||||| |||| | ||| | | | Sbjct 499 TCCTCTTTT---ACTTCTTCTTCCCATATAACAGAGTTTTACATTCCGAAAAACGT-CTT 444 Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171 | |||||| | | |||| |||| || ||| |||||| ||| ||||| |||||||| Sbjct 443 CACTCACGCGGCATTGCTGCATCAGGCTTTCGCCCATTGTGCAAGATTCCCTACTGCTGC 384 Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 ||||||||||||| ||| |||||||||||| ||| ||||| | | |||||||| | Sbjct 383 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCAACCTCTCAGTCCG 324 Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCA-TCC 290 ||| | ||||| | || |||| || ||||| | || |||| ||||| ||||| ||| Sbjct 323 GCTACCGATCGTCGCCTTGGTGCGCTCTTACCACACCAACTAGCTAATCAGACGCAGTCC 264 Query 291 C 291 | Sbjct 263 C 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068630103552