Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2028 289 2e-73
>seq2028
Length=154558
Score = 289 bits (320), Expect = 2e-73
Identities = 609/906 (67%), Gaps = 9/906 (1%)
Strand=Plus/Minus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || || |||| || ||||| | || || || ||||| || || | |||
Sbjct 60680 GAACCTTTACTGAAAGAAAACCCTCGAAGATTTGTTTTATTCCCAATTGAATTCCCAGAT 60621
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| | ||||| | || ||||||||||| ||||| ||||| || || |
Sbjct 60620 ATTTGGCAGAAATACAAGGAAGCTGAAGCTTCCTTTTGGACTACCGAGGAAGTGGACCTC 60561
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTT---ATCGAGCGGTGAACAACATTTCATTAAA 61203
|| | || | |||||||| | ||| | |||| ||||||||||
Sbjct 60560 ACCCATGATCTACGACACTGGGAGAAACTGAAATCT---GAAGAACGACATTTCATTTCG 60504
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| ||||| || || ||||| || || || ||||| || ||||||||| | ||||||||
Sbjct 60503 CACGTGTTAGCTTTTTTTGCTGCCTCAGATGGTATTGTAAATGAGAATCTTGTGGAACGT 60444
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| || || || |||||| | || || |||||||| || || ||||||||||| ||
Sbjct 60443 TTCAGTCAAGAAGTTCAAGTGACTGAAGCTCGTTGTTTTTATGGATTCCAGATTGCAATT 60384
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|| ||| |||| || || |||||||| || || || ||||| ||||| || |
Sbjct 60383 GAAAATATCCATTCTGAAATGTACAGCAAACTTATTGAAACGTATATCAGCGATCCCAAT 60324
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443
||| || ||||| || || || || || || ||| || ||| |||||| |||
Sbjct 60323 GAAAAAGAGTTCTTGTTTAACGCTATTGAAACCATGCCGTGTGTTAAGAAGAAAGCTGAT 60264
Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTT 61503
|||||| | || ||||| | | | ||| | | || || ||| ||||| |||| |||
Sbjct 60263 TGGGCCCTAAAGTGGATTAGCTCGAAAACATCCTCGTTCGGCGAAAGATTGGTGGCTTTT 60204
Query 61504 GCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAA 61563
|| | || || || | ||||||||||| ||||| || || || ||||| ||||||
Sbjct 60203 GCTGCCGTTGAAGGCATTTTTTTCAGTGGTAGCTTTGCAGCGATTTTCTGGTTAAAGAAA 60144
Query 61564 CGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATG 61623
||||| |||||||||||| | || || ||||| |||||||| | || || || |
Sbjct 60143 CGTGGTCTTATGCCCGGTTTAACATTTTCAAATGAATTGATATCCAGAGATGAAGGTCTA 60084
Query 61624 CATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAG 61683
|||||||||||||| || |||||| || ||||| | || || | ||
Sbjct 60083 CATTGTGATTTTGCATGCTTACTATTCTCAC---ATCTGCATCAGAAACCATCACAAGAA 60027
Query 61684 CGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCT 61743
| || ||| || || || || || || ||||| || || || |||| |||
Sbjct 60026 AGAGTAACCAGTATTATTGCAGATGCAGTTACAATAGAACAAGAGTTCTTGTCTGAGGCT 59967
Query 61744 TTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTT 61803
||||| ||| || || || |||||||| | | |||| |||||||| ||||||||
Sbjct 59966 TTGCCAGTCAGTCTGATTGGAATGAATTGCAAATTGATGTGTCAGTATATAGAATTTGTA 59907
Query 61804 GCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTT 61863
|| || ||| |||| || || || ||| |||||| | | | || || |||
Sbjct 59906 GCTGATCGTTTGTTAAGTGAATTAGGCTGCAAGAAAATCTATGGTGCAACGAATCCGTTT 59847
Query 61864 GATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGC 61923
|| || ||| || ||||| || || || || || ||||| || || || |||
Sbjct 59846 GACTTTATGACGATCATTTCTACAGAAGGTAAAACAAACTTTTTTGAAAAGAAAGTGGGC 59787
Query 61924 GACTAT 61929
|| |||
Sbjct 59786 GAATAT 59781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397490978157440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |