Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq167251 262 1e-67 seq1215361 147 6e-33 seq101277 114 3e-23 seq295647 113 1e-22 >seq167251 Length=232 Score = 262 bits (290), Expect = 1e-67 Identities = 197/230 (86%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 100 AGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGA 159 |||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||| | Sbjct 3 AGGCGGTTACTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTTGATA 62 Query 160 CTGCACGACT-AGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGT 218 ||| |||| ||| |||| |||||| | |||||| | ||||||| ||||||||||| Sbjct 63 CTGGGTGACTTAGAATGTGGTAGAGGGTAGCGGAATTTCTGGTGTAGCGGTGAAATGCGT 122 Query 219 AGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATG 278 |||||| | ||||||| |||||||||||||||| |||||| |||| ||||||| | | Sbjct 123 AGATATCAGAAGGAACATCAATGGCGAAGGCAGCTACCTGGGCCAACATTGACGCTGAGG 182 Query 279 CACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 328 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 CACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 232 >seq1215361 Length=2594 Score = 147 bits (162), Expect = 6e-33 Identities = 120/143 (84%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 268 TGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 327 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 60 Query 328 CCTAAACGATATCAACTAGTTGTTGGGGA-TTTACTTCCTTGGTAACGTAGCTAACGCGT 386 | |||||||| ||||| | | |||| | |||||| | | | || ||||||||| | Sbjct 61 CGTAAACGATGACAACTTGACGATGGGAAGGTTACTT-TTCGTTGTCGGAGCTAACGCAT 119 Query 387 GAAGTTGACCGCCTGGGGAATAC 409 |||||| ||||||||||| ||| Sbjct 120 TAAGTTGTCCGCCTGGGGAGTAC 142 >seq101277 Length=217 Score = 114 bits (126), Expect = 3e-23 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 145 TACCTAAAGAATCAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 204 Query 63 AAGCGTTAATCGG 75 ||||||||||||| Sbjct 205 AAGCGTTAATCGG 217 >seq295647 Length=264 Score = 113 bits (124), Expect = 1e-22 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 183 TACCATAGGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 242 Query 63 AAGCGTTAATCGGAATTACTGG 84 |||||||| |||| ||||||| Sbjct 243 AAGCGTTATCCGGATTTACTGG 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1273889151392