Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1110137 165 1e-38 >seq1110137 Length=859 Score = 165 bits (182), Expect = 1e-38 Identities = 185/246 (75%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 1 CTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 59 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 |||||||| |||||||| || || || ||| ||||| || || ||| | ||||| Sbjct 60 GTGTTTTTGATAAACAGTTGCAGCCACCTTTTCACTGCGGCCCCCGATCGCTTACCACGT 119 Query 127 C----GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 |||||| | || ||| ||||||||||||||||||| | |||||||||| || Sbjct 120 AAAGTGTTCACAATCAAGGGCGTACCTTCTCCCGAAGTTACGGTACAATTTTGCCGAGTT 179 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 |||| ||| ||||| | | | | |||||| |||||| |||||||||| |||||||||| Sbjct 180 CCTTCACCCGAGTTCTCTCAAGCACCTTAGAATTCTCATCCTGACCACCAGTGTCGGTTT 239 Query 243 ACGGTA 248 |||| Sbjct 240 GGGGTA 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686204677529