Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1110137 197 3e-48 seq152496 134 3e-29 seq1215361 104 5e-20 >seq1110137 Length=859 Score = 197 bits (218), Expect = 3e-48 Identities = 281/387 (73%), Gaps = 15/387 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||||||| | || || ||| | | Sbjct 472 CGACTACGCATTTCTGCCTCGCCTTAGGGGTCGACTCACCCTGCGCCGATTAACGTTGCG 531 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCAC--ACGCTACTCATGCC 118 | |||| |||||| |||| | || | || ||| || || ||| |||||||| | Sbjct 532 CAGGAAACCTTGGTCTTTCGGTGTGCGAGTTTTTCACTCG-CATTAACGTTACTCATGTC 590 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176 |||||| |||| | || | ||||| || | |||| | || ||||| | || ||| Sbjct 591 AGCATTCGCACTTCTGAT-ACCTCCAGCATCCC-TCACAGGACACCTTCAACGGCTTACA 648 Query 177 CGACGCTCCCCTACCCAACCACACAG-------GTTGCCACAGCTTCGGCGGATAACTTA 229 ||||||||||||||||| || || | |||| ||||||||| | || ||| Sbjct 649 GAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTA 708 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 |||||| ||||| || |||| | ||| ||||||||||||||||||| ||||| | Sbjct 709 -GCCCCGTTACATCTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAA 767 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 | |||||||||||| |||||||| |||||| |||||| || ||||||| ||| |||| Sbjct 768 ATGATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTATGCCTTCCCACATCGTTTACCAC 827 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTG 376 |||| | | || ||| ||||||||| Sbjct 828 TGAGCGATAATTTTGGGACCTTAGCTG 854 >seq152496 Length=227 Score = 134 bits (148), Expect = 3e-29 Identities = 148/195 (76%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACT---TAAGCCCCGCTACATTATCGGCGCGGAATCACTTGA 263 || ||||||||| ||||| | ||||||| ||||| || |||| | | ||| || Sbjct 2 CCGCAGCTTCGG----TAACTGGCTTAGCCCCGTTACATCTTCCGCGCAGGACGACTCGA 57 Query 264 CCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGT 323 |||||||||||||||| ||||| || |||||||||||| |||||||| ||||| ||| Sbjct 58 TCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTGACTGT 117 Query 324 CTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCT 383 | || |||| || ||||||||| || || |||||| ||||||||| | ||| Sbjct 118 TTTAGCCTTCCCACTTCGTTTCCCACTTAGCCA-ATTTTAGGGACCTTAGCTGGCGGTCT 176 Query 384 GGGCTGTTTCCCTCT 398 ||| ||||||||||| Sbjct 177 GGGTTGTTTCCCTCT 191 >seq1215361 Length=2594 Score = 104 bits (114), Expect = 5e-20 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 284 CTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT 343 |||| || |||||||||||| |||||||| |||| | |||||| || ||||||| || Sbjct 2594 CTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGCTGTCTATGCCTTCCCACATCGTT 2535 Query 344 TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | |||||||| | | |||||| ||||||||| | |||||| ||||||||||| Sbjct 2534 TACCACTGAGCGATAATTTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1163253617152