Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq167251 134 2e-29 seq295647 107 3e-21 seq101277 82.4 1e-13 >seq167251 Length=232 Score = 134 bits (148), Expect = 2e-29 Identities = 148/196 (76%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| |||||||||||| | | |||| | | |||||||||| || ||| Sbjct 196 CCCACGCTTTCGTGCCTCAGCGTCAATGTTGGCCCAGGTAGCTGCCTTCGCCATTGATGT 137 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||| | ||||||| | ||||| | || Sbjct 136 TCCTTCTGATATCTACGCATTTCACCGCTACACCAGAAATTCCGCTACCCTCTACCACAT 77 Query 121 TC-AAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 || ||| | |||| ||||||||| |||||||||| | ||||||||||||| Sbjct 76 TCTAAGTCACCCAGTATCAAATGCAATTCCCAGGTTGAGCCCGGGGATTTCACATCTGAC 17 Query 180 TTGCCTTCCCGCCTAC 195 || | |||||||| Sbjct 16 TTAAGTAACCGCCTAC 1 >seq295647 Length=264 Score = 107 bits (118), Expect = 3e-21 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 209 CCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTA 268 ||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| Sbjct 264 CCAGTAAATCCGGATAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA 205 Query 269 GCCGTGGCTTATTCCTCAGGTA 290 |||| |||||||||| |||| Sbjct 204 GCCGGTGCTTATTCCTATGGTA 183 >seq101277 Length=217 Score = 82.4 bits (90), Expect = 1e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 223 TAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||| ||| |||||||||||||||||||||||| ||||||||| ||| |||| Sbjct 212 TAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTGATTC 153 Query 283 CTCAGGTA 290 | ||||| Sbjct 152 TTTAGGTA 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819018486083