Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq167251 217 3e-54 seq1215361 138 3e-30 seq295647 102 2e-19 seq101277 77.0 8e-12 >seq167251 Length=232 Score = 217 bits (240), Expect = 3e-54 Identities = 188/232 (81%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 96 GTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGA 155 ||||| |||| ||||||||||| |||||| | ||||||||| || | ||| ||||| Sbjct 1 GTAGGCGGTTACTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTTGA 60 Query 156 AACTGCAGGGCT-AGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGC 214 |||| | || ||| || | || || || |||||| || ||||||||||||||||| Sbjct 61 TACTGGGTGACTTAGAATGTGGTAGAGGGTAGCGGAATTTCTGGTGTAGCGGTGAAATGC 120 Query 215 GTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGA 274 |||||||| || ||||||| || |||||||||| ||| |||| | | |||| |||| Sbjct 121 GTAGATATCAGAAGGAACATCAATGGCGAAGGCAGCTACCTGGGCCAACATTGACGCTGA 180 Query 275 GGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 326 ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 232 >seq1215361 Length=2594 Score = 138 bits (152), Expect = 3e-30 Identities = 117/143 (82%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 60 Query 326 CGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCA 385 |||||||||||| ||| | | ||| | || | | || || || ||| |||||| Sbjct 61 CGTAAACGATGACAACTTGACGATGGGAAGGTTACTT--TTCGTTGTCGGAGCTAACGCA 118 Query 386 ATAAGTATTCCACCTGGGGAGTA 408 ||||| ||| ||||||||||| Sbjct 119 TTAAGTTGTCCGCCTGGGGAGTA 141 >seq295647 Length=264 Score = 102 bits (112), Expect = 2e-19 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || ||||| Sbjct 189 AGGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGT 248 Query 67 TATCCGGAATTACTGG 82 |||||||| ||||||| Sbjct 249 TATCCGGATTTACTGG 264 >seq101277 Length=217 Score = 77.0 bits (84), Expect = 8e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 14 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 ||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| Sbjct 158 AGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188541739264