Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1211838 251 6e-62 seq1055522 178 1e-39 seq1170154 102 6e-17 >seq1211838 Length=1880 Score = 251 bits (278), Expect = 6e-62 Identities = 259/336 (77%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || ||||| || || ||||| | ||||| ||| |||| | || || |||| |||||| Sbjct 71 GAAAATCCCCGCCGCTTCGTGATCTTCCCTATCCAGTACCATGACATCTGGCTGATGTAC 130 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || ||||| ||||| || |||||||| | || |||||||| | ||||| |||||| | Sbjct 131 AAGAAGGCAGAAGCCTCATTCTGGACAGCAGAAGAGGTCGACCTATCCAAGGACATGGCT 190 Query 61162 GACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 |||||||| | | | || || || |||||||| || |||||||| ||||| Sbjct 191 CACTGGGAGGCCCTCAAAGAT-GGAGAGAGGCATTTCATCTCGCACGTGTTGGCCTTCTT 249 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCA 61280 |||||| |||||||| |||||||| |||||| | ||||||| ||| ||||| ||||| Sbjct 250 TGCCGCATCGGACGGAATCGTCAACGAGAATCTCGTGGAACGGTTCAGCCAGGAAGTGCA 309 Query 61281 AGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGA 61340 | |||||||||| ||||||||||| ||||||||||| ||||||||||| || || || Sbjct 310 GATAACGGAGGCGCGGTGTTTCTACGGTTTCCAGATTGCTATGGAGAATGTGCATTCCGA 369 Query 61341 GATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||||| | | || ||||||||||||| ||| Sbjct 370 GATGTACAGTCTGTTGATAGATACGTACATCAAGGA 405 >seq1055522 Length=411 Score = 178 bits (196), Expect = 1e-39 Identities = 252/349 (72%), Gaps = 4/349 (1%) Strand=Plus/Plus Query 66275 TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334 |||| |||| ||||| | ||| ||||||||||| |||||| | || || || Sbjct 16 TCGGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACG 75 Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 || ||| || || || || ||||||||||||||||| | || | ||||| ||| Sbjct 76 CGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCC 135 Query 66395 TCAATG-CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTC 66453 || || ||||| ||||| | |||||||| || |||| ||| || ||||| ||||| Sbjct 136 TCCTTGCCCGTG-TTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTC 194 Query 66454 CAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGAC 66513 ||| ||||| ||||||| ||| || ||| ||| |||||||||||||| || || Sbjct 195 CAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGT 254 Query 66514 ATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGAT 66573 |||||| |||| |||||||| || || | ||||| ||| |||| ||||||||| |||| Sbjct 255 GTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGCGAT 314 Query 66574 G-GGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621 | | | ||| | || || || ||||| || || ||||||||||| Sbjct 315 GTAGCTACCCTTG-GCACGGATGCAGTGAATGTTGAGGCCAATACCACC 362 >seq1170154 Length=949 Score = 102 bits (112), Expect = 6e-17 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539 ||||| || || | | |||||||| | ||||||||| | || ||| || ||| Sbjct 47 TTTGGCGAGAGAATCATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGTTTT 106 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 ||||| || || |||||||||||||||||||| ||||| || || || |||||||| ||| Sbjct 107 GCCGCCATTTTCTGGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAACGAG 166 Query 61600 TTGATATCACGCGACGAGG 61618 ||||| || || || |||| Sbjct 167 TTGATCTCTCGAGATGAGG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391665028736720