Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_032409.1 Length=6589 Score E Sequences producing significant alignments: (Bits) Value seq1020775 172 2e-39 seq547886 136 2e-28 seq843932 132 2e-27 seq167430 113 2e-21 >seq1020775 Length=679 Score = 172 bits (190), Expect = 2e-39 Identities = 362/536 (68%), Gaps = 3/536 (1%) Strand=Plus/Minus Query 1574 TTACTTGGTGATCAGAATTGTGCCGAAGGAGAAGGAACTCAAAGAGGCGGCGAGAGGTTT 1633 ||||||||| | ||| |||| || || || || ||||| ||| || |||| | Sbjct 600 TTACTTGGTATTGAGACTTGTTCCAAAAGAAAAAGAACTTAAACTAAGTGCTAGAGCCTA 541 Query 1634 CGGATGCAAAACGTATGAGGATCGCGCTCGAACATTAGTTCAAGAGTATAACTCTGCAAA 1693 |||||| || || ||||| ||| | ||| |||||||||| | ||| || Sbjct 540 CGGATGTAAGACTTATGAAGATAGATGTCGCGGGATAGTTCAAGAATTAAACGTAGCTCG 481 Query 1694 GTTCCTGAACAAGTACAGTGATGAGGAGGCAATGACCCTCTCTGAATTAACCTTGTTGAG 1753 |||||| | ||||||||||||| ||||| ||||| | |||||| | || | | Sbjct 480 ATTCCTGGAGGAGTACAGTGATGAAGAGGCTATGACACAGTCTGAACTCCAGTTAATCAA 421 Query 1754 AAAACTCTATGCGTTCAGGCACATGGACCGAGCCTACCCCGGATTCAAGGAAATCATCAT 1813 ||||||| || ||||| | || ||| || | || | |||| | |||||||| Sbjct 420 GAAACTCTTAGCCTTCAGAACTCTCGAAAAAGCTTATACGGGCTACAAGAAGATCATCAT 361 Query 1814 CAACGTTGATGCTAGTGCATGGAATAACCGTTTTCGGCATGCAGCTACAGAGTCGGTTCT 1873 |||||| ||||| ||||||| |||| |||| | | | |||| | | || | Sbjct 360 CAACGTAGATGCGTCATCATGGAACAACCATTTTAGAAACGAAGCTGTATGACCTATTAT 301 Query 1874 CCGCTCAACTCTGGATAAGGTGTA-TGACAAGCGTTTGTTTTCCAAGACTCATGAAGCCT 1932 ||||| || || | || || | | || |||||||| | |||| || | Sbjct 300 GACAATGACTCTCGACAATATCTACGGAACATCAATT-TTTTCCAAAATTCATATTGCAT 242 Query 1933 ACCAAAATTCCTTTATTTACATGCCTGATCAAGACAAAGTTTACTATTGGGATGGCCAGG 1992 || ||||| | ||| | || |||||||| ||||| ||||| ||||| |||||||| || | Sbjct 241 ACAAAAATACATTTTTGTATATGCCTGACCAAGATAAAGTATACTACTGGGATGGACAAG 182 Query 1993 AAGGGGGAATAGAAGGATTAAATCAAGACACATGGGTGTATGTGTACACACATCAGATCA 2052 |||| || || || || || |||||| |||| ||||||| || | ||||| |||| Sbjct 181 AAGGAGGGATCGACGGCTTGAATCAATACACTTGGGTGTTAACATATATCCATCAAATCA 122 Query 2053 AAGTGTGTTTGGAGAGGTACCCCTACCC-CTACCACATTCTCTGTAAAGGGGATGA 2107 |||| || || ||| | ||| ||||| || |||||| | || || || ||||| Sbjct 121 AAGTTTGCATGAAGAATTTCCCTTACCCTTTATCACATTTTGTGCAAGGGAGATGA 66 >seq547886 Length=256 Score = 136 bits (150), Expect = 2e-28 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 1911 TTTTCCAAGACTCATGAAGCCTACCAAAATTCCTTTATTTACATGCCTGATCAAGACAAA 1970 |||||||| || || ||||| || || | ||| | ||||||||||| || || || Sbjct 18 TTTTCCAAAACACAGATCGCCTATCAGAAAACATTTTTGTACATGCCTGACCAGGATAAG 77 Query 1971 GTTTACTATTGGGATGGCCAGGAAGGGGGAATAGAAGGATTAAATCAAGACACATGGGTG 2030 || || || |||||||| |||||||| || || || || ||||||||| |||| |||||| Sbjct 78 GTATATTACTGGGATGGTCAGGAAGGAGGGATTGACGGGTTAAATCAATACACTTGGGTG 137 Query 2031 TATGTGTACACACATCAGATCAAAGTGTGTTTGGAGAGGTACCCCTACCCCTACCACATT 2090 ||| || | || |||||||| || ||| || ||| | || ||||| || || ||| Sbjct 138 TATACTTATATCCACCAGATCAAGGTCTGTATGAAGAACTTTCCTTACCCGTATCATATT 197 Query 2091 CTCTGTAAAGGGGATGATCTAAGAGCAGCAATCATGATACCTCCT 2135 || ||||| | || |||||||| | || || | || |||||| Sbjct 198 CTGTGTAAGGAAGACGATCTAAGGGTGGCTGTCCTCATCCCTCCT 242 >seq843932 Length=427 Score = 132 bits (146), Expect = 2e-27 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 1911 TTTTCCAAGACTCATGAAGCCTACCAAAATTCCTTTATTTACATGCCTGATCAAGACAAA 1970 ||||||||||| || |||||| |||| | || | |||||||| ||||| || ||| Sbjct 154 TTTTCCAAGACGCAACTTGCCTAC-AAAACACTTTCCTGTACATGCCGGATCAGGATAAA 212 Query 1971 GTTTACTATTGGGATGGCCAGGAAGGGGGAATAGAAGGATTAAATCAAGACACATGGGTG 2030 || ||||||||| | || || ||||| ||||| || ||||||||||| || ||||||| Sbjct 213 GTGTACTATTGGAACGGTCAAGAAGGTGGAATTGACGGATTAAATCAGTACTCATGGGTA 272 Query 2031 TATGTGTACACACATCAGATCAAAGTGTGTTTGGAGAGGTACCCCTACCCCTACCACATT 2090 || |||| |||||||| ||||| ||| || | | || || || || ||||| Sbjct 273 TACACATACATTCATCAGATAAAAGTATGTATGAAAGATTTTCCTTATCCTTATCACATC 332 Query 2091 CTCTGTAAAGGGGATGATCTAAGAG 2115 ||||| |||| |||||||| |||| Sbjct 333 CTCTGCAAAGAAGATGATCTCAGAG 357 >seq167430 Length=232 Score = 113 bits (124), Expect = 2e-21 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 1911 TTTTCCAAGACTCATGAAGCCTACCAAAATTCCTTTATTTACATGCCTGATCAAGACAAA 1970 |||||||| || || ||||| || ||| | ||| | ||||||||||| || || || Sbjct 63 TTTTCCAAAACACAGATCGCCTATCAGAATACATTTTTGTACATGCCTGACCAGGATAAG 122 Query 1971 GTTTACTATTGGGATGGCCAGGAAGGGGGAATAGAAGGATTAAATCAAGACACATGGGTG 2030 || | || |||||||| |||||||| || || || || ||||||||| |||| |||||| Sbjct 123 GTATGTTACTGGGATGGTCAGGAAGGAGGGATTGACGGGTTAAATCAATACACTTGGGTG 182 Query 2031 TATGTGTACACACATCAGATCAAAGTGTGTTTGGAGAGGTACCCCTACCC 2080 ||| || | ||||||||||| || ||| || ||| | || ||||| Sbjct 183 TATACTTATATCCATCAGATCAAGGTCTGTATGAAGAACTTTCCTTACCC 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20682199653116