Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_033313.1 Length=1789 Score E Sequences producing significant alignments: (Bits) Value seq1120130 297 2e-77 seq629507 127 2e-26 seq787887 95.1 1e-16 seq166083 78.8 1e-11 >seq1120130 Length=885 Score = 297 bits (328), Expect = 2e-77 Identities = 587/859 (68%), Gaps = 16/859 (2%) Strand=Plus/Minus Query 574 TACCAGATGTGGCATGTTACGCACGAGCTCAAATTTGCAGTAGAGATAAAAATAAAATTA 633 |||| || || || ||||||||||| || ||||||||||||||||||||||||||| | | Sbjct 851 TACCCGACGTAGCGTGTTACGCACGTGCGCAAATTTGCAGTAGAGATAAAAATAAAGTAA 792 Query 634 GAGCTACTTGGGGTTACCCGTTGTCAGTATTTCTGACAGAAGCTCAATATTTCTATCCTA 693 |||| || ||||||||||| ||| |||| | | | || |||| || || || ||||| Sbjct 791 GAGCCACATGGGGTTACCCATTGACAGTTTATTTAACTGAAGGCCAGTACTTTTATCCAC 732 Query 694 TACTGAAAGAGCTAAAACAGCGAGATAAGCCAAAGATAGCTTATGGAGTTGAAATTGGAA 753 | || || | || || | || ||||| || |||| || || | ||||| || | Sbjct 731 TTCTTAACGCACTGAAGAACCGCTCAAAGCCGAAAGTAGCGTACGGCATCGAAATAGGGA 672 Query 754 CAGGAGGCATGGGCTTCTTAAACGAGATGGCGTCTTATTATAAAACTAAC---AATTTCC 810 | ||||||||| |||| | ||||| ||||||| | | | || || || | | Sbjct 671 CTGGAGGCATGAACTTCGTCAACGAAATGGCGT---AACAAACAAGCGACGGAAACTACT 615 Query 811 TGATTGGTGATTGGAGAAAATTTGATAAGACAATTCCAGCTTGGTTAATAAGAGATGCTT 870 | | || || ||| ||||||||| || ||| | || || ||| | || |||| || | Sbjct 614 TTGTAGGAGACTGGTCAAAATTTGACAAAACAGTACCTGCATGGCTTATCGGAGACGCAT 555 Query 871 TCAGAATGATCATGCGACACATAGATCTAACCAAAGTTCAATCAACTGGTGGAAGAATAT 930 ||| |||||| |||||||||| || | | | || | |||| |||| ||| | Sbjct 554 TCAAAATGATTTTGCGACACATCGACACAGCACACGTAATGTGTTCTGGAGGAAAAATCT 495 Query 931 GGCCAGTTAGAGCTTCAAAGACGAAGAAGCGCCTCGCAAA-ATTAATCAATTATTTTATA 989 |||| || | |||||||| | | | || ||| || ||||| |||| || Sbjct 494 GGCCTGTACGTCACTCAAAGACCATGGTTAGATTCCGAAAGATGGTTCAAT-ATTTCATT 436 Query 990 GATACACCAGTACAATTAAGTAGTGGCGAGCGATTTGTAAAACATGGCGGTGTACCATCA 1049 |||||||| ||||| |||||| ||| |||||||| ||||||||||||| || ||||| Sbjct 435 GATACACCTGTACAGCTAAGTACTGGAGAGCGATTCATAAAACATGGCGGCGTGCCATCT 376 Query 1050 GGTTCATCGTTCACTAATCTGATAGATGGAATAGTTAACGCAATTGTTACTAGATATACA 1109 || || | ||||| || || | || || || | || ||| | || ||||||||| Sbjct 375 GGATCGTGCTTCACAAACTTGGTTGACGGCATTATAAATGCACTCGTCACTAGATAT--- 319 Query 1110 GT-GTATTCA--ATGACGGGAGAACTCCCGTATGATGACTTATACCTAGGTGACGATATA 1166 || ||| || ||||| | | |||| || ||||||| | || |||| || || || Sbjct 318 GTCATATACAACATGACTGAACAACTACCAATTGATGACGTGTATTTAGGCGATGACATC 259 Query 1167 GTTGCTGTAACAAAGAAGCCATTGGATCTGCATTTATTTGCAGAAATAGCTGAAAAGCAA 1226 | || ||||| | ||| | ||| || | | || | | ||||| | ||| Sbjct 258 TTCGCCATAACAGAACGACCACTAGATTTGGAAATGTTCTCGGCTATAGCAATGGATCAA 199 Query 1227 TTTTCAATGATCTTCAATCCAGATAAAAGTTATCAAACATCTCAGAAGGAGAATATACAT 1286 || || ||| |||||| |||| || ||||||||||| ||| || || || Sbjct 198 TTCTCCATGCGCTTCAACGCAGAGAAGAGTTATCAAACTAGCGAGATAACAAACATCCAC 139 Query 1287 TTCCTCGGCTATTACAATATACATGGTATGCCGTACAAACCAGTGGATACAGTGATTGCA 1346 || || || |||| || || ||||| | |||||||| || | |||||||| | || Sbjct 138 TTTCTAGGATATTTTAACATGCATGGCGTTCCGTACAAGCCTATTGATACAGTAGTAGCT 79 Query 1347 TCATCTATATATCCTGAGCGACCA-TGCGAAACTAAATTTGAAACGATAACTCGGTTAAT 1405 ||||||||||| || || | |||| || | | | || || ||||| || | | || Sbjct 78 TCATCTATATACCCAGAACAACCAGTGAG-ATCCAAGTTCGAAACAATCGTCAGAATGAT 20 Query 1406 CGGACAAGCTTATTCATGC 1424 ||| ||||| ||||||||| Sbjct 19 CGGCCAAGCATATTCATGC 1 >seq629507 Length=387 Score = 127 bits (140), Expect = 2e-26 Identities = 248/361 (69%), Gaps = 8/361 (2%) Strand=Plus/Plus Query 201 GCTTTGAATAGAGTGTACGACCCAGAGAAGATAAGTGAAGTTCGAACAAAGTATCATCGT 260 || || |||| |||| |||||||| || | |||||||| |||| |||||||| || Sbjct 2 GCATTAAATAAAGTGCTCGACCCAGGCAAAGTTGGTGAAGTTAGAACGAAGTATCACCGA 61 Query 261 GCAAAGCTAAACATGGAAGATCTAAGAACCGATCTCTTAGAATACTCATGCGCAAAAG-T 319 || ||||| | || |||||| | | |||||| |||||| | | |||| | | Sbjct 62 GCTCGCTTAAACGTAGACGATCTACGCGCTGATCTCACTGAATACAGAAGTCCAAAGGCT 121 Query 320 ACCACGCAT-ACAGGATGACTCATACTATATGATCTTCGAAAGTGTTGACAAAGATATCT 378 ||| || |||| ||| | || || || | ||| || |||||| ||| |||| Sbjct 122 ACCCGACACCACAG--TGATGCTTATTACGCTATATACGAGAGCGTTGACCGAGACATCT 179 Query 379 TTGGAGATATGAAAGTAATTCCTTTAACACATGGAGCAGTAGCCAACCATCCAGATCTGC 438 | || || || | | ||| || ||||| ||||||||||| || || || || |||| Sbjct 180 TCGGCGACATTTTTATCACTCCATTCACACACGGAGCAGTAGCGAAGCAACCTGACCTGC 239 Query 439 CTAGACAGAAATCACCTGGATTACCATATAAGACACAAGGTTACGCGACAAAAGGGGAGG 498 | | | || |||||||| |||||| || ||||||||| |||||||| || | Sbjct 240 CAAAATCAAAGTCACCTGGCTTACCACTGAAATTGCAAGGTTACAAAACAAAAGGAGAAG 299 Query 499 CTTTAGATGATCCGAATACTTTGAAAAATATACGAGCAA--CATGGTATGCAATCGAAAG 556 || | | |||||| | ||| || || |||| |||| |||||||||||||||| | Sbjct 300 CTCTTGCTGATCCACAAGTTTTAAATAACATAC--GCAAGGAATGGTATGCAATCGAACG 357 Query 557 A 557 | Sbjct 358 A 358 >seq787887 Length=469 Score = 95.1 bits (104), Expect = 1e-16 Identities = 187/273 (68%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 150 GGATTTCCTTTCAACTACCAACCAAGTAGACTAGATCGAAATGCTTTATTCGCTTTGAAT 209 ||||| || |||||||| ||||| || | || ||||||| |||||||| || ||| Sbjct 271 GGATTCCCGTTCAACTATCAACCGTCCAGGATCGACAGAAATGCGTTATTCGCATTAAAT 212 Query 210 AGAGTGTACGACCCAGAGAAGATAAGTGAAGTTCGAACAAAGTATCATCGTGCAAAGCTA 269 | |||| |||||||| || | |||||||| |||| ||||||||||| || | || Sbjct 211 AAAGTGCTCGACCCAGGCAAAGTTGGTGAAGTTAGAACGAAGTATCATCGAGCTCATCTG 152 Query 270 AACATGGAAGATCTAAGAACCGATCTCTTAGAATACTCATGCGCAAAAGTACCACG-CA- 327 ||| | || |||||| | | || ||| || ||| | |||| | ||| || || Sbjct 151 AACGTAGACGATCTACGCGCTGACCTCGCTGAGTACAGCAGTCCAAAGGCACCCCGACAC 92 Query 328 TACAGGATGACTCATACTATATGATCTTCGAAAGTGTTGACAAAGATATCTTTGGAGATA 387 |||| | | | || ||| || | || || |||||| |||||| || || || | Sbjct 91 CACAGCA--ATGCTTATTATGCTATATATGAGAGCGTTGACCGAGATATTTTCGGCGACA 34 Query 388 TGAAAGTAATTCCTTTAACACATGGAGCAGTAG 420 | | | ||| | |||||||||||||||| Sbjct 33 TCTTTATTACTCCGCTCACACATGGAGCAGTAG 1 >seq166083 Length=231 Score = 78.8 bits (86), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 363 GTTGACAAAGATATCTTTGGAGATATGAAAGTAATTCCTTTAACACATGGAGCAGTAGCC 422 |||||| |||||| || || || || | | ||| | |||||||||||||||| Sbjct 3 GTTGACCGAGATATTTTCGGCGACATCTTTATTACTCCGCTCACACATGGAGCAGTAGGA 62 Query 423 AACCATCCAGATCTGCC-TAGACAGAAATCACCTGGATTACCATATAAGACACAAGGTTA 481 || || || |||||||| || ||| |||||||||| |||||| || || ||||| Sbjct 63 AAGCAACCTGATCTGCCAAAGTCAG-AATCACCTGGCTTACCACTCAAATTGCAGGGTTA 121 Query 482 CGCGACAAAAGGGGAGGCTTTAGATGATCCGAATACTTTGAAAAATATACGAGCAA--CA 539 | |||||||| || ||| | | |||||| | ||| || || || | |||| | Sbjct 122 CAAAACAAAAGGAGAAGCTCTCGCTGATCCACAGGTTTTAAATAACATCC--GCAAGGAA 179 Query 540 TGGTATGCAATCGAAAGA 557 |||||||| || ||| || Sbjct 180 TGGTATGCTATAGAACGA 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5543305650090