Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_033764.1 Length=1728 Score E Sequences producing significant alignments: (Bits) Value seq1188839 178 1e-41 >seq1188839 Length=1309 Score = 178 bits (196), Expect = 1e-41 Identities = 261/367 (71%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 359 CCGCTAACGACCGGCGCTGTAGCGAACCACCCTGACTTTCCAGGGGCTAAGTCGCCCGGC 418 ||| |||| ||||| || || || || ||||||||||||||||| ||||||| || || Sbjct 429 CCGATAACTACCGGTGCCGTTGCTAAACACCCTGACTTTCCAGGCTCTAAGTCACCTGGA 370 Query 419 TTACCTTATAAGACACTTGGCTACTCAACCAAGCGTGATGCCGTATCGGATCCTGCCGTC 478 ||||||| || | || || | |||| | || |||||||| || || || Sbjct 369 CTACCTTACAAAATACAAGGGTTTGCAACAGAACGCGATGCCGTTAACGACCCACGAGTT 310 Query 479 ATGGACGAGATCAGGAAGATATGGTACGCCGTTGAAGCCAACCAGCAAGTAGAGCTGCCA 538 | | || || | || | | |||| ||| ||| |||||| |||| ||||| || Sbjct 309 TTAGTTGAAATTCGAAAAACTTAGTACAGCGTAGAATGCAACCATTAAGTTGAGCTACCT 250 Query 539 GACGTAGCCTGCTATGCACGAGCCCAAATATGTACTCGAGACACGAACAAAGTCCGAGCT 598 |||||||||||||||||||| || ||||| |||||| | ||| ||||| || |||| Sbjct 249 GACGTAGCCTGCTATGCACGCGCTCAAATTTGTACTGGCGACGTCAACAAGGTTAGAGCA 190 Query 599 ACATGGGGCTACCCTCTCGCCGTATATATGGCAGAGGCTGCTTATTTCTATCCAATCCTA 658 ||| || | ||||| | | || || ||||| || |||||||| || || || | || Sbjct 189 ACAAGGAGTTACCCGTTTACAGTCTACATGGCTGAAGCTGCTTACTTTTACCCCGTACTC 130 Query 659 GACGTTCTTAAAGACAAATCAAAACCTCA-CATCGCATATGGTGTTGAGATGGCTAATGG 717 || | || || | |||| |||| || |||||| ||||| || ||||||||||||| Sbjct 129 GATGGCCTCAAGG-CAAAAGTTAACCCCATCATCGCCTATGGAGTACAGATGGCTAATGG 71 Query 718 AGGCATG 724 ||| ||| Sbjct 70 AGGTATG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5350632348292