Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq201740 190 4e-46 seq83090 141 2e-31 >seq201740 Length=8247 Score = 190 bits (210), Expect = 4e-46 Identities = 249/337 (74%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||||| ||||| ||||||||| ||||| || || ||||| ||||||||| Sbjct 2588 TACCCCGAG-AGGGGAGTGAAATAGTTTCTGAAACCATATGCTTACAACAAGTCGGAGCC 2530 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAG 119 || | | ||||||||||||||||||| | |||||||| ||||||| || | || | Sbjct 2529 C-GTTAATGGGTGACGGCGTGCCTTTTGTAGAATGAGCCGGCGAGTTA--CGATTACATG 2473 Query 120 CGAGGTTAAGGGCTTCAG--GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 | |||||||| || | | | | ||||||||||||||| ||||| || |||||| Sbjct 2472 CAAGGTTAAG---TTGAAAAGACGG--AGCCGAAGTGAAAGCAAGCCTGAATAGGGCGTT 2418 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 ||| |||| ||||| ||||||| |||||||| ||| |||||||||||||| | Sbjct 2417 TAGTATGTGGTCGTAGACCCGAAACCAGGTGATCTAGCCATGAGCAGGTTGAAGTTAATG 2358 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| | ||||||||||||||| |||||||||| |||||||| | || | Sbjct 2357 TAACAGTTAATGGAGGACCGAACCAACGTTCGTTGAAAAGACCGTGGATGACTTGTGGCT 2298 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || ||||||| |||||| ||| ||| |||||| || Sbjct 2297 AGCGGTGAAATTCCAATCGAACCTGGAGATAGCTGGT 2261 >seq83090 Length=1507 Score = 141 bits (156), Expect = 2e-31 Identities = 195/267 (73%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 ||||| ||||||||||||| | ||||||||| |||||||| || |||||||||| Sbjct 2 GGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGCGGTGCGTGGCGAGGTTAAC 61 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTG-GTGG 187 | | || | ||| || || ||||||||| | || |||||| | ||| | ||| Sbjct 62 C-CGTGTGG---GGTAGTCGTAGCGAAAGCGAGTCCGAATAGGGCGTTGTAGTCGCGTGT 117 Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 | |||||| |||| | |||||||||||| | |||| ||||| |||||| ||| Sbjct 118 C-CTAGACCCGAAGCGGAGTGATCTACCCATGGCCAGGGTGAAGCGACGGTAAGACGTCG 176 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||| ||||||| | |||||||| | |||||| | |||||||||||||| Sbjct 177 TGGAGGCCCGAACCCACTTAGGTTGAAAACTGAGGGGATGAGCTGTGGGTAGGGGTGAAA 236 Query 308 GGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||| | |||||| || Sbjct 237 GGCCAATCAAACTCTGTGATAGCTGGT 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 970810468352