Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq55454 197 2e-48
seq102835 95.1 2e-17
seq57292 77.0 5e-12
>seq55454
Length=9146
Score = 197 bits (218), Expect = 2e-48
Identities = 177/218 (81%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 7677 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 7734
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| ||||||||||| ||||||| ||||||| | | ||| | | ||
Sbjct 7735 CTCGTTCAAGGGGAACAATTGCAAGCCCCTATCCCAATCACGAAGGAGGTTCCACGGGTT 7794
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | | | | || || | | || || || | | |||||||||||||||||||
Sbjct 7795 ACCCAGTCTTTACAGACAGGGATAAAAACACGCTGCTTCCTTCAGTGTAGCGCGCGTGCG 7854
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||||||||||
Sbjct 7855 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 7892
>seq102835
Length=6735
Score = 95.1 bits (104), Expect = 2e-17
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1488 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 1432
>seq57292
Length=7035
Score = 77.0 bits (84), Expect = 5e-12
Identities = 52/57 (91%), Gaps = 1/57 (2%)
Strand=Plus/Plus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct 695 TCAGTGTAGCGCGCGTGCGGCCCCAGACAGCTA-GGGCATCACAGACCTGTTATTGC 750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750510100940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |