Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq55454 84.2 1e-14 >seq55454 Length=9146 Score = 84.2 bits (92), Expect = 1e-14 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGA-TAACATCGCC 59 ||||||||| |||||| |||| || ||| |||| ||||||| ||| |||| | | Sbjct 8204 GAACCCAAATACTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATT-TGAGTAACTCAGGC 8262 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || || ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 8263 GGATCGCTGGTTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 8320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277866213240