Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq55454 167 4e-39
>seq55454
Length=9146
Score = 167 bits (184), Expect = 4e-39
Identities = 193/250 (77%), Gaps = 10/250 (4%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATA-CATTAGCATG 131
||||||||||||||||||||||| |||| |||||| || || ||||| || | |||||
Sbjct 8566 TTTACTTTGAAAAAATTAGAGTGCTCAACGCAGGCGATTCGCCTGAATAACAGT-GCATG 8508
Query 132 GAATAATAGAATAGGACGTGCGGTT-CTATTTTGTTGGTTTCTAGGACCGCCG--TAATG 188
||||||||||| | || | | ||| || || ||||||||| | ||| | | |||||
Sbjct 8507 GAATAATAGAACAAGA--TCCTGTTTCTGTTCTGTTGGTTTTT-GGAATACAGGATAATG 8451
Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248
||||| ||||| || |||||| | ||||| | ||||||||||||||||||
Sbjct 8450 ATTAAGAGGGACAGACGGGGGCATTCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCG 8391
Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308
||||| ||||||||||||||| || ||||| ||||||||||| |||| ||||||
Sbjct 8390 TCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTGATCA-AGAACGA 8332
Query 309 AAGTTAGGGG 318
||||||| ||
Sbjct 8331 AAGTTAGAGG 8322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913328269568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |