Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq35330 104 2e-20 seq201740 86.0 6e-15 >seq35330 Length=4946 Score = 104 bits (114), Expect = 2e-20 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || | |||||| ||||||||| ||| ||||||| ||||| |||| Sbjct 550 GGTGGATGCCTTGGCACTAGAAGGCGATGAAGGACGTAATACGCTGCGATAAGCTTCGGG 491 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | || ||| |||||||| |||| ||||||||||| ||||| Sbjct 490 GAGTTGCGAATAAACTTTGATCCGAAGATTTCCGAATGGGGAAACCC 444 >seq201740 Length=8247 Score = 86.0 bits (94), Expect = 6e-15 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| || | | || ||| |||||||| ||| | |||||| ||||| |||| Sbjct 3102 GGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCGGG 3043 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATT 122 || | | ||| | |||||||| |||| ||||||||||| ||||| ||| || Sbjct 3042 GAGCTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTT 2988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475855340596