Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq201740 297 5e-78 seq39665 75.2 3e-11 >seq201740 Length=8247 Score = 297 bits (328), Expect = 5e-78 Identities = 268/336 (80%), Gaps = 1/336 (0%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||||| | | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4360 ATACCTTACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTA 4301 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 |||||||| |||||||| ||||||||||||||||| || ||||| || ||| | | | Sbjct 4300 CAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGG 4241 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | |||| ||||| |||| || || || | ||| || |||||||| | || Sbjct 4240 TTAAATTTAGGGGCTCAACCCCT-AACCGCCTTGGAAACTACATTACTAGAGTATAGGAG 4182 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| |||||||| || ||||||| ||| ||||||||||||| || |||||||||| || Sbjct 4181 AGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTG 4122 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| || |||| || ||||||| | |||||||||||||||||||||| | Sbjct 4121 GCGAAGGCGGCTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGGAGCAAATA 4062 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| |||||||| Sbjct 4061 GGATTAGATACCCTAGTAGTCCACGCCGTAAACGAT 4026 >seq39665 Length=22783 Score = 75.2 bits (82), Expect = 3e-11 Identities = 70/88 (80%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 240 TGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 ||||||||||| || || || || ||||||| | | | ||||| || |||| ||||| Sbjct 22696 TGGCGAAGGCAACCTTCTATGAAAA-ACTGACGTTGAGGGACGAAGGCTTGGGTAGCAAT 22754 Query 300 CAGGATTAGATACCCTGGTAGTCCACGC 327 ||||||||||||||| |||||||| || Sbjct 22755 AAGGATTAGATACCCTAGTAGTCCAAGC 22782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1286962561664