Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq83090 91.5 2e-16 seq201740 86.0 7e-15 >seq83090 Length=1507 Score = 91.5 bits (100), Expect = 2e-16 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||||||| || ||||| ||| | | ||| ||||| |||||||| Sbjct 1194 AAACCGACACAGGTGGTCGGGTAGAGAATACTCAGGTGATCGAGAGAATCGTGGTTAAGG 1253 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 |||| |||||| || ||| |||||||||||| || ||| Sbjct 1254 AACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 1291 >seq201740 Length=8247 Score = 86.0 bits (94), Expect = 7e-15 Identities = 123/171 (72%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 26 AACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGA 85 ||||||||||||| ||| | |||||| ||||||| ||| || | | |||||| Sbjct 1448 AACGGACACACGTGGTCAAGGAGAATATCCTAAGGCAAGCGAGATAACTATAGCTAAGGA 1389 Query 86 ACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGC 145 ||| ||||| | |||| |||| || | || || ||| | | || ||| ||| | Sbjct 1388 ACTCTGCAAAATAACCCCGTAAGTTAGCGAGAAGGGGAGCTCAT--AGCAATATGAGT-C 1332 Query 146 GCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 |||| ||| |||||| ||| |||||||| ||||||||||| || ||| || Sbjct 1331 GCAGTGAAGAGGTCCGGGCGACTGTTTAGCAAAAACACAGCTCTCTGCTAA 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530147560664