Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq201740 95.1 1e-17 seq83090 93.3 4e-17 >seq201740 Length=8247 Score = 95.1 bits (104), Expect = 1e-17 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||| || || ||| || |||||||| |||| Sbjct 1314 GCGACTGTTTAGCAAAAACACAGCTCTCTGCTAAGTCGTAAGACGATGTATAGGGGGTGA 1255 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||| |||||||||| Sbjct 1254 CGCCTGCCCAGTGCTGGAAGGTTAA 1230 >seq83090 Length=1507 Score = 93.3 bits (102), Expect = 4e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| ||| |||| | ||||||||||||||||||||||| | ||| || | | Sbjct 1335 GGTCGCAGAGGCCAGAGAGAAGCGACTGTTTATTAAAAACACAGGTCCGTGCGAAGATGT 1394 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| || ||||| || ||||||||||||||||| |||||||||| Sbjct 1395 AAGTCGATGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 1440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475855340596