Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 262 1e-67
seq175310 152 1e-34
seq68454 152 1e-34
seq83090 138 3e-30
seq202179 118 3e-24
>seq201740
Length=8247
Score = 262 bits (290), Expect = 1e-67
Identities = 230/281 (82%), Gaps = 4/281 (1%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || |||||||||||||| | | ||||||| |||||| | ||||||||
Sbjct 1036 CGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCGAGTCTATAGCCGAGACAGC 1095
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| | ||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||
Sbjct 1096 GTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACC 1155
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC-GATCAAGAGCTTCGCGTT 179
||||||||||||| ||||||||||||||| || |||||||| | |||| |||||||| |
Sbjct 1156 TTAGGACCGTTATAGTTACGGCCGCCGTTCACTGGGGCTTCAGTTCAA-AGCTTCGCTTA 1214
Query 180 AGCTAACCCCATC-AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
||||| | ||| |||||||||| |||| ||||||||||||| |||||||| || |
Sbjct 1215 CGCTAA-CAAATCTCTTTAACCTTCCAGCACTGGGCAGGCGTCACCCCCTATACATCGTC 1273
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
|| || || |||||| ||||||||||| |||||||||||
Sbjct 1274 TTACGACTTAGCAGAGAGCTGTGTTTTTGCTAAACAGTCGC 1314
>seq175310
Length=6051
Score = 152 bits (168), Expect = 1e-34
Identities = 197/270 (73%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||| ||| || ||||||||||||||||| | | |||||||| |||||||
Sbjct 5845 GCATCTGCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGCATCGTT 5786
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
| | ||||| |||||| | | | ||| | | ||||||||||||||||||||||||| |||
Sbjct 5785 AAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGGACCCTTA 5726
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGTTAGCTAACCCC 189
| | || ||||||| || | ||||| || |||| | | || ||| |||
Sbjct 5725 TAGGTAAGGCCGCCATTAATCGGGGTATCCTTCAAAACCTAATTTTTTTTAATTAAGTAA 5666
Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTGTTT 248
|| ||| || ||| || ||||||| | |||||| | |||| | | ||| | |||
Sbjct 5665 ATTCGTTACCCAGCCGACATCGGGCAGACATCACACTCAATACTTTGATATTTAATCTTT 5606
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|||||||||| |||||||| ||||||||||
Sbjct 5605 GCAGAGTGCTTTGTTTTTATTAAACAGTCG 5576
>seq68454
Length=3912
Score = 152 bits (168), Expect = 1e-34
Identities = 200/275 (73%), Gaps = 3/275 (1%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||||||||| | ||||||||
Sbjct 3714 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGT 3655
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| |||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 3654 ATCGTTAAACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 3595
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT--TCGCGTTAGCTA 184
|| | || | || ||||||| || | ||||| || |||| | || || | | ||
Sbjct 3594 CCCTCATAGATAAGGCCGCCATTAATCGGGGTGTCCTTCAAAACCTAATCTTATCAATTA 3535
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCG 243
| | |||| ||| || ||| || ||||||| | |||||| | |||| | | |||
Sbjct 3534 AGCAAATCAGTTATCCAGCCGACATCGGGCAGACATCACACTCAATACTTTGATATTTTA 3475
Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||||||||||||| |||||| | ||||||||||
Sbjct 3474 TCTTTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 3440
>seq83090
Length=1507
Score = 138 bits (152), Expect = 3e-30
Identities = 175/236 (74%), Gaps = 5/236 (2%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|||||||||| ||||||||||||||||| || ||||| || |||| | | || ||| |
Sbjct 1440 TTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACATCTTCGCACGG 1381
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA-TGAGCTTAC 313
||||||||||||||||||||||| | |||| ||| ||||| || ||| |
Sbjct 1380 ACCTGTGTTTTTAATAAACAGTCGCTTCTCTCTGGCCTCTGCGACCACCACCCCGCTCCC 1321
Query 314 GGAGCAA--GTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTG 371
|||| | |||||| || | ||||||||||||||||||| | | |||||
Sbjct 1320 ACCGCAAAGGGTGTTCACCAGGCATGGTCCCCCTTCTCCCGAAGTTACGGGGGCATTTTG 1261
Query 372 CCTAGTTCCTT-CCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|| |||||||| || ||| ||||||| | | ||| ||||||||||||| |||||
Sbjct 1260 CCGAGTTCCTTAACCACGA-TTCTCTCGATCACCTGAGTATTCTCTACCCGACCAC 1206
>seq202179
Length=4533
Score = 118 bits (130), Expect = 3e-24
Identities = 199/282 (71%), Gaps = 11/282 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||||||||| | ||||||||
Sbjct 4162 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 4103
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC-CTTAGG 125
|||||||| |||||| |||| | | | | ||| | | ||||| |||||||||| |||||
Sbjct 4102 ATCGTTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACTTTTAGG 4043
Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAG 181
||| | | |||| ||||||| || ||||||| ||| || | | | || ||
Sbjct 4042 ACCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCGACATCAAATAGTATTATAT 3984
Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241
||| | || |||||| |||||||||||||| | |||| ||||| | | |||
Sbjct 3983 TTAATTCTCTCTGTTAACCAGCCGGCACCGGGCAGATATTACACTTTATACATAGATTTT 3924
Query 242 --CGTGTTT--GCAGAGTGC-TGTGTTTTTAATAAACAGTCG 278
| ||| ||| ||||| |||||||| | ||||||||||
Sbjct 3923 TAAATCTTTCAGCAAAGTGCTTGTGTTTTAATTAAACAGTCG 3882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1258221462272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |