Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq96829 244 2e-62 seq201740 86.0 1e-14 >seq96829 Length=1121 Score = 244 bits (270), Expect = 2e-62 Identities = 206/251 (82%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAA-CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||||||||| | |||| ||||| |||||||||||||||||| |||||||||||||| | Sbjct 987 GTCATCAGTAGTGCAAAAGCTAACGTGTCTCATGACGGTCTAACCCCAGCTCACGTTCAC 928 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 ||||||||| || |||||| ||||||| |||||||||||| |||||||||||| || Sbjct 927 TATTAGTGGATGGACAATCGAACGCTTGGAAAATTCTGCTTCGCAATGATAGGAAGAACC 868 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||| ||||||| ||||| | |||||||||| | ||| ||||||||| | Sbjct 867 GACATCGAAGGAACAAAAAGTGACGTCAC--TGAACGCTTGACCGCCTTAAGCCAGTTGT 810 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 |||||||||| |||||||| ||| ||| || | ||| | | | |||||||||| Sbjct 809 CCCTGTGGTAGCTTTTCTGTCACTTCTTGCTTAAAACTCTTTAAGTCAAAAGGATCGAAG 750 Query 269 GGCCACACTTT 279 |||| |||||| Sbjct 749 GGCCCCACTTT 739 >seq201740 Length=8247 Score = 86.0 bits (94), Expect = 1e-14 Identities = 127/177 (72%), Gaps = 10/177 (6%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| |||| ||||| ||||| Sbjct 482 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 541 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||| | | || | | ||| || ||||||||||||| | |||| Sbjct 542 CTTGGGACCGACTACAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 598 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACA--AGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| || | | |||| |||||||| | |||| ||||| Sbjct 599 CCCGTCGATATGGACTCTTGG--GCAAGATCAGCCTGTTATCCCCGAGGTACCTTTT 653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852652615296