Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq96829 244 2e-62
seq201740 86.0 1e-14
>seq96829
Length=1121
Score = 244 bits (270), Expect = 2e-62
Identities = 206/251 (82%), Gaps = 3/251 (1%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAA-CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88
||||||||||| | |||| ||||| |||||||||||||||||| |||||||||||||| |
Sbjct 987 GTCATCAGTAGTGCAAAAGCTAACGTGTCTCATGACGGTCTAACCCCAGCTCACGTTCAC 928
Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148
||||||||| || |||||| ||||||| |||||||||||| |||||||||||| ||
Sbjct 927 TATTAGTGGATGGACAATCGAACGCTTGGAAAATTCTGCTTCGCAATGATAGGAAGAACC 868
Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208
|||||||||||| ||||||| ||||| | |||||||||| | ||| ||||||||| |
Sbjct 867 GACATCGAAGGAACAAAAAGTGACGTCAC--TGAACGCTTGACCGCCTTAAGCCAGTTGT 810
Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268
|||||||||| |||||||| ||| ||| || | ||| | | | ||||||||||
Sbjct 809 CCCTGTGGTAGCTTTTCTGTCACTTCTTGCTTAAAACTCTTTAAGTCAAAAGGATCGAAG 750
Query 269 GGCCACACTTT 279
|||| ||||||
Sbjct 749 GGCCCCACTTT 739
>seq201740
Length=8247
Score = 86.0 bits (94), Expect = 1e-14
Identities = 127/177 (72%), Gaps = 10/177 (6%)
Strand=Plus/Plus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| |||||||||||||| ||| || ||| |||| ||||| |||||
Sbjct 482 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 541
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||||| | | || | | ||| || ||||||||||||| | ||||
Sbjct 542 CTTGGGACCGACTACAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 598
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACA--AGCCAGTTATCCCTGTGGTAACTTTT 224
||||| |||| || ||||| || | | |||| |||||||| | |||| |||||
Sbjct 599 CCCGTCGATATGGACTCTTGG--GCAAGATCAGCCTGTTATCCCCGAGGTACCTTTT 653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 852652615296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |