Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 260 3e-67
>seq201740
Length=8247
Score = 260 bits (288), Expect = 3e-67
Identities = 253/320 (79%), Gaps = 4/320 (1%)
Strand=Plus/Minus
Query 21 GAGATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGA 80
|| ||| | |||| |||| || |||| | | ||||||||| |||| || | ||||| |
Sbjct 951 GATATGCAGACGCTAGTAGGCATGGAGTCACCATTGGGATACCACCCTTGCTATATTGAA 892
Query 81 TTTCTAACCGGACGACGTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTG 139
||||||| || ||| |||| | | | |||||||| | | ||| ||||| ||||
Sbjct 891 ATTCTAACTTGA-GACC-ATAATCTGGTCTAAGGACAGTGCCTGGTGGGTAGTTTAACTG 834
Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199
||||||| |||||| |||||||||||||||||||||||| | |||||| || ||||||
Sbjct 833 GGGCGGTTGCCTCCTAAAGAGTAACGGAGGCGCCCAAAGGTTCCCTCAATATGAATGGAA 774
Query 200 ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAG 259
| ||| | | || ||||||| ||||||||| |||||||||| || |||||| |||||
Sbjct 773 ATCATATGTAGAGCGCAAAGGTAAAAGGGTGCTTGACTGCGAGACATACAAGTCGAGCAG 714
Query 260 GGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGA 319
| |||||||| ||||||| ||||||||||||||| ||||| ||||||||||| |||||
Sbjct 713 GAACGAAAGTTGGGCTTAGTGATCCGGCGGTGCT-TGTGGAAGGGCCGTCGCTCAACGGA 655
Query 320 TAAAAGCTACCCTGGGGATA 339
|||||| |||| |||||||
Sbjct 654 TAAAAGGTACCTCGGGGATA 635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 980390834816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |