Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq201740 260 3e-67 >seq201740 Length=8247 Score = 260 bits (288), Expect = 3e-67 Identities = 253/320 (79%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 21 GAGATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGA 80 || ||| | |||| |||| || |||| | | ||||||||| |||| || | ||||| | Sbjct 951 GATATGCAGACGCTAGTAGGCATGGAGTCACCATTGGGATACCACCCTTGCTATATTGAA 892 Query 81 TTTCTAACCGGACGACGTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTG 139 ||||||| || ||| |||| | | | |||||||| | | ||| ||||| |||| Sbjct 891 ATTCTAACTTGA-GACC-ATAATCTGGTCTAAGGACAGTGCCTGGTGGGTAGTTTAACTG 834 Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199 ||||||| |||||| |||||||||||||||||||||||| | |||||| || |||||| Sbjct 833 GGGCGGTTGCCTCCTAAAGAGTAACGGAGGCGCCCAAAGGTTCCCTCAATATGAATGGAA 774 Query 200 ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAG 259 | ||| | | || ||||||| ||||||||| |||||||||| || |||||| ||||| Sbjct 773 ATCATATGTAGAGCGCAAAGGTAAAAGGGTGCTTGACTGCGAGACATACAAGTCGAGCAG 714 Query 260 GGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGA 319 | |||||||| ||||||| ||||||||||||||| ||||| ||||||||||| ||||| Sbjct 713 GAACGAAAGTTGGGCTTAGTGATCCGGCGGTGCT-TGTGGAAGGGCCGTCGCTCAACGGA 655 Query 320 TAAAAGCTACCCTGGGGATA 339 |||||| |||| ||||||| Sbjct 654 TAAAAGGTACCTCGGGGATA 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980390834816