Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 131 2e-28
seq175310 75.2 1e-11
>seq201740
Length=8247
Score = 131 bits (144), Expect = 2e-28
Identities = 117/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| ||||||||||| | |||||||||| | ||||| ||||||| |
Sbjct 1017 CGGGGTCTTTCCGTCTAATCGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCG 1076
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| ||| || ||||||| |||| |||||||||
Sbjct 1077 AGTCTATAGCCGAGACAGCGTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCT 1136
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 1137 GACAAGGAATTTCGCTACCTTAGGACCGTTA 1167
>seq175310
Length=6051
Score = 75.2 bits (82), Expect = 1e-11
Identities = 91/128 (71%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105
||||| | |||||| ||| | || | |||||||||||||| | | |||||||
Sbjct 5853 GGTAAGCAGCATCTGCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTT 5794
Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165
|| ||||| |||||| | | | ||| | | |||||||||||||||||||||
Sbjct 5793 GCATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAG 5734
Query 166 GACCGTTA 173
|||| |||
Sbjct 5733 GACCCTTA 5726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546115860684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |