Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 215 1e-53
seq53773 134 3e-29
>seq201740
Length=8247
Score = 215 bits (238), Expect = 1e-53
Identities = 259/346 (75%), Gaps = 16/346 (5%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
||||||||||||||||||||| | || |||||||||||| || |||||||||||||||
Sbjct 4413 CTTTACAATCCGAAGACCTTCAT-CAGTCACGCGGCATTG-CTCCATCAGGCTTTCGCCC 4470
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
||||| || |||||| |||||||||| |||||| ||| ||| |||||||||||| |||
Sbjct 4471 ATTGTGAAAAATTCCCTACTGCTGCCTTCCGTAGAAGTTTGGGCCGTGTCTCAGTCCCAA 4530
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| | | ||||||||||||| | | |||| ||||| ||||||| ||||||||||| |
Sbjct 4531 TGTGGCCGTTCATCCTCTCAGATCGGCTACGCATCGTTACCTTGGTAAGCCATTACCTTA 4590
Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCC---CCTG 237
|||||||| |||| || | | | |||| ||||| ||| | | | ||| | |
Sbjct 4591 CCAACTAGTTAATGCGCCGCATCCCCATCAATTAGCG-AAG--CAAATGCTCCTTTCATT 4647
Query 238 CTTTCTC-------CCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCC 290
||| || | || |||||||||||||| ||||||| | ||||| ||
Sbjct 4648 ATTTATCATTGCAAATAAATAACATATGCGGTATTAGCTGTCGTTTCCAACAGTTATTCC 4707
Query 291 CCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCT 335
|||||| || || || || | |||||||||||| |||| ||
Sbjct 4708 CCACTAAATGGTAGGTTAGATACGTGTTACTCACCCGTTCGCCACT 4753
>seq53773
Length=2002
Score = 134 bits (148), Expect = 3e-29
Identities = 162/222 (73%), Gaps = 14/222 (6%)
Strand=Plus/Minus
Query 114 GTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCAT 173
|| |||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||| |
Sbjct 2002 GTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACAGATCGTCGGCTTGGTGAGCCGT 1943
Query 174 TACCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCC 233
|||||||||||||| |||||| ||| |||||||| |||| | ||
Sbjct 1942 TACCTCACCAACTACCTAATCTGACGCGGGCTCATCCATCAGCGATA------AA----- 1894
Query 234 CCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCA 293
|||| | |||||| ||| |||||||||| | |||| || ||||| || |
Sbjct 1893 ---TCTTTTTTCCGTAGAGAATATACGGTATTAGCTTTTATTTCTAAAAGTTATTCCGTA 1837
Query 294 CTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335
|| || ||||||| | | ||||||||||||| ||| ||
Sbjct 1836 CTGATGGGTAGATTCCCACGTGTTACTCACCCGTCTGCCACT 1795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1069807588480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |