Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq83090 495 1e-137
seq201740 259 2e-66
seq35330 212 2e-52
seq118745 75.2 4e-11
>seq83090
Length=1507
Score = 495 bits (548), Expect = 1e-137
Identities = 367/426 (86%), Gaps = 2/426 (0%)
Strand=Plus/Minus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||| | | |||||| |||||| | ||||||| ||| ||||| | || | ||||||||
Sbjct 426 TCGACAATGAAGCTTA-TCCCCCACTGTCTCACTGCCACGCTCACCCTGACTGGCATTCG 368
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119
|||||| ||||| || |||| | || || ||| | ||||||||| |||||||||||
Sbjct 367 GAGTTTAGTTGACGTCAGTAACCCGGTAGGGCCCATCAGCCATCCAGTAGCTCTACCTCC 308
Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179
| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 307 AGCAAGAACCACGCAACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACAGAG 248
Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 247 TTTGATTGGCCTTTCACCCCTACCCACAGCTCATCCCCTCAGTTTTCAACCTAAGTGGGT 188
Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299
|||| |||||||| |||||||| ||||||| |||| |||||| ||||||||| |||||
Sbjct 187 TCGGGCCTCCACGACGTCTTACCGTCGCTTCACCCTGGCCATGGGTAGATCACTCCGCTT 128
Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359
||||||| | | || ||| ||||||||||||||||||||||||||||| |||||||
Sbjct 127 CGGGTCTAGGACACGCGACTACAACGCCCTATTCGGACTCGCTTTCGCTACGACTACCCC 68
Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419
||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||
Sbjct 67 ACACGGGTTAACCTCGCCACGCACCGCTAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 8
Query 420 GTCACC 425
|||||
Sbjct 7 ATCACC 2
>seq201740
Length=8247
Score = 259 bits (286), Expect = 2e-66
Identities = 319/433 (74%), Gaps = 15/433 (3%)
Strand=Plus/Plus
Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193
|||||| |||||| || ||||||||||||||||||| | | ||| |||||| |||
Sbjct 2231 GACGCTAGTCCTAAAACTATATCGGGGAGAACCAGCTATCTCCAGGTTCGATTGGAATTT 2290
Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253
|||| ||| ||||| ||||||| | |||||||| | || ||||||||||||||
Sbjct 2291 CACCGCTAGCCACAAGTCATCCACGGTCTTTTCAACGAACGTTGGTTCGGTCCTCCATTA 2350
Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313
| |||| ||||||||||| ||||| |||||||| | | ||||||||| |
Sbjct 2351 ACTGTTACATTAACTTCAACCTGCTCATGGCTAGATCACCTGGTTTCGGGTCTACGACCA 2410
Query 314 GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-CCCACACGGGTTAACC 372
||| | ||||||||||| | || |||||| || ||||| | | | ||||||
Sbjct 2411 CATACT-AAACGCCCTATTCAGGCTTGCTTTCACTTCGGCTCCGTCTTTTCAACTTAACC 2469
Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432
| || | || ||||||| |||||||||| ||||||||||||||||||| |
Sbjct 2470 TTGC-ATGTAATCGTAACTCGCCGGCTCATTCTACAAAAGGCACGCCGTCACC-----CA 2523
Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492
| || || |||||||| ||||| ||| |||||||||| |||||||||||||
Sbjct 2524 TTAACGG-------GCTCCGACTTGTTGTAAGCATATGGTTTCAGAAACTATTTCACTCC 2576
Query 493 CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552
|| | ||||||||||||||||||||||||||||||| || | |||||||| | |
Sbjct 2577 CCTCTCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTAATTGGTTA 2636
Query 553 GTATTTAGGCTTA 565
|||||||| ||||
Sbjct 2637 GTATTTAGCCTTA 2649
>seq35330
Length=4946
Score = 212 bits (234), Expect = 2e-52
Identities = 172/205 (84%), Gaps = 5/205 (2%)
Strand=Plus/Plus
Query 396 GGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT-ACCTAAAAGGCACTTCAGCTCCGAC 454
|||||||||||||||||||||||| ||||| ||| || | ||| |||| |||
Sbjct 1 GGCTCATTCTTCAAAAGGCACGCCATCACCCCACCACCAAAGATGCAAG---GCTCTGAC 57
Query 455 GGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCT 514
|||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 58 GGATTGTAAGCACATGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCA 117
Query 515 TTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGT 574
|||||||||||||| | ||||||||||||||||| | ||||||||| |||| ||||||||
Sbjct 118 TTCCCTCACGGTAC-TATCCGCTATCGGTCACCAGGAAGTATTTAGCCTTACCGGGTGGT 176
Query 575 CCCGCCAGATTCACACGAAATTTCA 599
||| | | |||| || ||||||
Sbjct 177 CCCCCTATGTTCAAACAGGATTTCA 201
>seq118745
Length=1145
Score = 75.2 bits (82), Expect = 4e-11
Identities = 55/64 (86%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 255 GTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTG 314
|||||||| ||||||| |||| |||||| ||||||||| |||||||||||| || | ||
Sbjct 1082 GTCTTACCGTCGCTTCACCCTGGCCATGGGTAGATCACTCCGCTTCGGGTCTAGAACATG 1141
Query 315 CCAC 318
||||
Sbjct 1142 CCAC 1145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1813882717184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |