Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 239 1e-60
seq35330 150 4e-34
>seq201740
Length=8247
Score = 239 bits (264), Expect = 1e-60
Identities = 297/393 (76%), Gaps = 14/393 (4%)
Strand=Plus/Plus
Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89
||||||||| || |||||||||||||| | | | ||||| | ||| |||||||| |
Sbjct 2319 TTTTCAACGAACGTTGGTTCGGTCCTCCATTAACT-GTTACATTAACTT-CAACCTGCTC 2376
Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGAC 149
|| || |||||| || ||||| |||||||| || | |||| |||||||| | || |
Sbjct 2377 AT-GGCTAGATCACCTGGTTT-CGGGTCTACGACC-ACATACTAAACGCCCTATTCAGGC 2433
Query 150 TCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTG 208
| ||||| | || || |||| || ||| | | | |||| | | ||| |||| |
Sbjct 2434 TTGCTTT-CACTTCGGCTCCGTCTTTTCAACTTAACCTTGCATGTAATCGTAACTCGCCG 2492
Query 209 ACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCA 268
| |||| ||||||||| |||| |||||||| || | |||||| ||| ||||| |||
Sbjct 2493 GCTCATTCTACAAAAGGCACGCCGTCACCCATTAACG--GGCTCCGACTTGTTGTAAGCA 2550
Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328
|| |||||||| | |||||||||||||||||| ||||| |||||| ||||||||||||||
Sbjct 2551 TATGGTTTCAGAAACTATTTCACTCCCCTCTC-GGGGTACTTTTCACCTTTCCCTCACGG 2609
Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT--GGAGGATGGTCCCCCCATA 386
|||| ||||||||||||| | | |||||||||||||| | || ||||| | || |
Sbjct 2610 TACTGGTTCACTATCGGTAATTGGTTAGTATTTAGCCTTACGCAG--TGGTCTGCGCAAA 2667
Query 387 TTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||| ||||| ||| | ||||| || | |||||
Sbjct 2668 TTCCGACAAGGTTCCACGTGCCTCGCCGTACTC 2700
>seq35330
Length=4946
Score = 150 bits (166), Expect = 4e-34
Identities = 166/216 (77%), Gaps = 10/216 (5%)
Strand=Plus/Plus
Query 212 CATTATACAAAAGGTACGCAGTCACCCAAC----AAAG-TG---GGCTCCCACTGCTTGT 263
|||| | ||||||| |||| |||||| || |||| || ||||| || | ||||
Sbjct 5 CATTCTTCAAAAGGCACGCCATCACCCCACCACCAAAGATGCAAGGCTCTGACGGATTGT 64
Query 264 ACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCT 323
| ||| | ||||||||| |||||||||||||||| ||||||| |||||| || ||||||
Sbjct 65 AAGCACATGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCATTCCCT 123
Query 324 CACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCC 383
|||||||||| | | |||||||||| | ||||||||||||| || |||||||||
Sbjct 124 CACGGTACTA-TCCGCTATCGGTCACCAGGAAGTATTTAGCCTTACCGGGTGGTCCCCCT 182
Query 384 ATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
|| |||| ||| |||| |||| ||| | |||||
Sbjct 183 ATGTTCAAACAGGATTTCACGTGTCCCGCCTTACTC 218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1239060729344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |