Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 223 7e-56
seq53773 163 6e-38
>seq201740
Length=8247
Score = 223 bits (246), Expect = 7e-56
Identities = 238/312 (76%), Gaps = 7/312 (2%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| ||||||| |||| ||||||||| || || ||| |||||||||| ||||||
Sbjct 4445 GGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTCCCTACTGCTGCCTTCCGTAG 4504
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct 4505 AAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCATCCTCTCAGATCGGCTACGCAT 4564
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||| |||||| || |||| || |||||||| |||| ||||| |||||| | |
Sbjct 4565 CGTTACCTTGGTAAGCCATTACCTTACCAACTAGTTAATGCGCCGCATCCCCATCAATTA 4624
Query 181 GCGA--TAAAT----CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTA 234
|||| |||| |||| | | | ||| | | ||| ||||||||||||
Sbjct 4625 GCGAAGCAAATGCTCCTTTCATTATTTATCATTGCAAATAAATAACA-TATGCGGTATTA 4683
Query 235 GCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCC 294
|| |||||||||| |||||||| | || || || ||||| |||||||||||||||
Sbjct 4684 GCTGTCGTTTCCAACAGTTATTCCCCACTAAATGGTAGGTTAGATACGTGTTACTCACCC 4743
Query 295 GTCCGCCACTAA 306
|| |||||||||
Sbjct 4744 GTTCGCCACTAA 4755
>seq53773
Length=2002
Score = 163 bits (180), Expect = 6e-38
Identities = 171/227 (75%), Gaps = 17/227 (7%)
Strand=Plus/Minus
Query 80 GTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTAT 139
|||||| |||||| | ||| |||||||| || ||||| |||||||||||||||| || |
Sbjct 2002 GTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACAGATCGTCGGCTTGGTGAGCCGT 1943
Query 140 TATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAA 199
|| |||||||||||||||||| | |||| || |||| ||||||||||||||||
Sbjct 1942 TACCTCACCAACTACCTAATCTGACGCGGGCTCATCCATCAGCGATAAATCTTT------ 1889
Query 200 AGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCA 259
||| || | ||| |||||||||| || |||| ||| ||||||||
Sbjct 1888 ----------TTTCCGTAGAGAATATACGGTATTAGCTTTTATTTCTAAAAGTTATTCCG 1839
Query 260 CTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306
|||| || || || | ||||||||||||||||||| ||||||||
Sbjct 1838 TACTGATGGGTAGATT-CCCACGTGTTACTCACCCGTCTGCCACTAA 1793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 996358112256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |