Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq201740 75.2 1e-11 >seq201740 Length=8247 Score = 75.2 bits (82), Expect = 1e-11 Identities = 81/106 (76%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| |||||||||| || ||| ||||||||||| | || |||||| |||| Sbjct 658 GTTGAGCGACGGCCCTTCCACA-AGCACCGCCGGATCACTAAGCCCAACTTTCGTTCCTG 716 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || |||||||||||||| ||| | || |||| || Sbjct 717 CTCGACTTGTATGTCTCGCAGTCAAGCACCCTTTTACCTTTGCGCT 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472661680592