Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq201740 322 7e-86 >seq201740 Length=8247 Score = 322 bits (356), Expect = 7e-86 Identities = 231/266 (87%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 10 CTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCAC 69 ||||| |||||||||| |||||| ||||| | | || || ||||| ||||||| ||| Sbjct 319 CTTCGCGCTTAGATGCTTTCAGCGCTTATTCATGCCCTACATAGCTACCCAGCTGTGCCA 378 Query 70 TTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACA 129 |||| |||||||||||||||||||| |||||| ||||||||||||||||| | ||| Sbjct 379 CTGGCGTGACAACTGGTGCACCAGAGGTAGGTCCATTCCGGTCCTCTCGTACTAGGAACA 438 Query 130 GCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCT 189 ||| |||||||||| |||||||||| | |||||||||||||||||||| ||||||||| Sbjct 439 GCTTTCCTCAAATTTCTTACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCT 498 Query 190 GAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAG 249 |||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||| Sbjct 499 AAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCGACTACAG 558 Query 250 CCCCAGGATGAGACGAGCCGACATCG 275 |||||||||| ||||||||||||||| Sbjct 559 CCCCAGGATGCGACGAGCCGACATCG 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779253040976