Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 201 3e-49
seq53773 116 9e-24
>seq201740
Length=8247
Score = 201 bits (222), Expect = 3e-49
Identities = 159/191 (83%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
|||||||| |||||| ||||| ||| |||||||||| ||| |||||||||| |||||||
Sbjct 4413 CTTTACAATCCGAAGACCTTCATCAGTCACGCGGCATTGCTCCATCAGGCTTTCGCCCAT 4472
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
|||| || |||||| |||||||||| |||||| ||| ||| |||||||||||| ||| ||
Sbjct 4473 TGTGAAAAATTCCCTACTGCTGCCTTCCGTAGAAGTTTGGGCCGTGTCTCAGTCCCAATG 4532
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
|||| | ||||||||||||| | |||| | ||||| ||| ||| ||||||||| ||
Sbjct 4533 TGGCCGTTCATCCTCTCAGATCGGCTACGCATCGTTACCTTGGTAAGCCATTACCTTACC 4592
Query 184 AACTAGCTAAT 194
|||||| ||||
Sbjct 4593 AACTAGTTAAT 4603
>seq53773
Length=2002
Score = 116 bits (128), Expect = 9e-24
Identities = 209/304 (69%), Gaps = 26/304 (9%)
Strand=Plus/Minus
Query 115 GTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCAT 174
|| |||||||||||| |||||||||||||||||||| |||||||| || |||| ||| |
Sbjct 2002 GTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACAGATCGTCGGCTTGGTGAGCCGT 1943
Query 175 TACCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCC 234
|||| | ||||||| |||||| | ||| |||||| || || | ||
Sbjct 1942 TACCTCACCAACTACCTAATCTGACGCGGGCTCATCCATCAGCGATA------AA----- 1894
Query 235 CCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCT 294
||||| || || ||| |||||||||| |||| | ||||| ||
Sbjct 1893 ---TCTTTTTTCCGTAGAGAATATACGGTATTAGCTTTTATTTCTAAAAGTTATTCCGTA 1837
Query 295 CCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAA--GCAGCA 352
| || || |||||| ||||||||||||| |||||| | | || | ||||
Sbjct 1836 CTGATGGGTAGATTCCCACGTGTTACTCACCCGTCTGCCACT----AACTAATTGGAGCA 1781
Query 353 AGCTGCTTCCTGTTA--CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATC 410
||| || ||| ||||||||||||||||||||| || ||||||||||||| |
Sbjct 1780 AGC----CCCAATTAGTCCGTTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCGTCC 1725
Query 411 TGAG 414
||||
Sbjct 1724 TGAG 1721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1219899996416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |