Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq201740 367 3e-99
>seq201740
Length=8247
Score = 367 bits (406), Expect = 3e-99
Identities = 322/399 (81%), Gaps = 9/399 (2%)
Strand=Plus/Minus
Query 10 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 69
|| ||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |
Sbjct 4350 AGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTACAAGCGTTGT 4291
Query 70 CCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTA 129
||||||||| ||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct 4290 CCGGAATTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGGTTAAATTTAG 4231
Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGG 189
||||||||||| || || || |||||| || ||||||| ||||| || |||||
Sbjct 4230 GGGCTCAACCCCTA-ACCGCCTTGGAAACTACATTACTAGAGTATAGGAGAGGTTAGTGG 4172
Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249
|||| | ||||||||||| ||||||||||||| | |||||||||||||||||||||||
Sbjct 4171 AATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTGGCGAAGGCGG 4112
Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309
|| |||| || | |||||| || ||| ||||||||||||||||||| |||||||||||
Sbjct 4111 CTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGGAGCAAATAGGATTAGATA 4052
Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGG 369
|||| ||||||||||||||||||||||| ||||| |||| | ||| || | |
Sbjct 4051 CCCTAGTAGTCCACGCCGTAAACGATGAGTACTAAGTGTTG----CCATGAG----GCAG 4000
Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
||| | ||| |||||| |||||| ||| |||| | ||||
Sbjct 3999 TGCTGTAGCTAACGCATTAAGTACTCCGCCTGAGTAGTA 3961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200739263488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |