Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq201740 367 3e-99 >seq201740 Length=8247 Score = 367 bits (406), Expect = 3e-99 Identities = 322/399 (81%), Gaps = 9/399 (2%) Strand=Plus/Minus Query 10 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 69 || ||||| ||||||||||||||||||||||||||||||||||||||| | |||||| | Sbjct 4350 AGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTACAAGCGTTGT 4291 Query 70 CCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTA 129 ||||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct 4290 CCGGAATTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGGTTAAATTTAG 4231 Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGG 189 ||||||||||| || || || |||||| || ||||||| ||||| || ||||| Sbjct 4230 GGGCTCAACCCCTA-ACCGCCTTGGAAACTACATTACTAGAGTATAGGAGAGGTTAGTGG 4172 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||| | ||||||||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct 4171 AATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTGGCGAAGGCGG 4112 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 || |||| || | |||||| || ||| ||||||||||||||||||| ||||||||||| Sbjct 4111 CTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGGAGCAAATAGGATTAGATA 4052 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGG 369 |||| ||||||||||||||||||||||| ||||| |||| | ||| || | | Sbjct 4051 CCCTAGTAGTCCACGCCGTAAACGATGAGTACTAAGTGTTG----CCATGAG----GCAG 4000 Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| | ||| |||||| |||||| ||| |||| | |||| Sbjct 3999 TGCTGTAGCTAACGCATTAAGTACTCCGCCTGAGTAGTA 3961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200739263488