Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq55454 215 1e-53 seq102835 107 4e-21 seq57292 77.0 6e-12 >seq55454 Length=9146 Score = 215 bits (238), Expect = 1e-53 Identities = 205/258 (79%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||||| ||||| ||| ||| |||||||||||||||| Sbjct 7933 CTTCTTAGAGGGACAAGCGGCTCCTAGCCGCACGAAACA-GAG-CAATAACAGGTCTGTG 7876 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || ||| | Sbjct 7875 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAAGCAGCGTGTTTTTAT 7816 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || || | | || | |||||||| | || ||| ||||| | ||||||| | ||| Sbjct 7815 CCCTGTCTGTAAAGACTGGGTAACCCGTGGAACCTCCTTCGTGATTGGGATAGGGGCTTG 7756 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | ||| |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 7755 CAATTGTTCCCCTTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 7696 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 7695 ACGTCCCTGCCCTTTGTA 7678 >seq102835 Length=6735 Score = 107 bits (118), Expect = 4e-21 Identities = 86/100 (86%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||||| ||||| ||| ||| |||||||||||||||| Sbjct 1391 CTTCTTAGAGGGACAAGCGGCTCCTAGCCGCACGAAACA-GAG-CAATAACAGGTCTGTG 1448 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||| | ||||||||||||||||||||||| Sbjct 1449 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGA 1488 >seq57292 Length=7035 Score = 77.0 bits (84), Expect = 6e-12 Identities = 52/57 (91%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| Sbjct 750 GCAATAACAGGTCTGTGATGCCC-TAGCTGTCTGGGGCCGCACGCGCGCTACACTGA 695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945262824448