Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq55454 215 1e-53
seq102835 107 4e-21
seq57292 77.0 6e-12
>seq55454
Length=9146
Score = 215 bits (238), Expect = 1e-53
Identities = 205/258 (79%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | |||||| ||||| ||| ||| ||||||||||||||||
Sbjct 7933 CTTCTTAGAGGGACAAGCGGCTCCTAGCCGCACGAAACA-GAG-CAATAACAGGTCTGTG 7876
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | ||||||||||||||||||||||| || || || ||| |
Sbjct 7875 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAAGCAGCGTGTTTTTAT 7816
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| || | | || | |||||||| | || ||| ||||| | ||||||| | |||
Sbjct 7815 CCCTGTCTGTAAAGACTGGGTAACCCGTGGAACCTCCTTCGTGATTGGGATAGGGGCTTG 7756
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | ||| |||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 7755 CAATTGTTCCCCTTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 7696
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 7695 ACGTCCCTGCCCTTTGTA 7678
>seq102835
Length=6735
Score = 107 bits (118), Expect = 4e-21
Identities = 86/100 (86%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | |||||| ||||| ||| ||| ||||||||||||||||
Sbjct 1391 CTTCTTAGAGGGACAAGCGGCTCCTAGCCGCACGAAACA-GAG-CAATAACAGGTCTGTG 1448
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170
|||||||||||||| | |||||||||||||||||||||||
Sbjct 1449 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGA 1488
>seq57292
Length=7035
Score = 77.0 bits (84), Expect = 6e-12
Identities = 52/57 (91%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170
||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct 750 GCAATAACAGGTCTGTGATGCCC-TAGCTGTCTGGGGCCGCACGCGCGCTACACTGA 695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945262824448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |