Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq83090 268 3e-69
seq201740 219 1e-54
>seq83090
Length=1507
Score = 268 bits (296), Expect = 3e-69
Identities = 356/485 (73%), Gaps = 12/485 (2%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||||||| |||||| |||||| | |||||||||| | |||||||||||||
Sbjct 87 CGAGTCCGAATAGGGCGTTGTAGTCGCGTGTCCTAGACCCGAAGCGGAGTGATCTACCCA 146
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|||||||| ||||| |||||| ||| | |||||| ||||||||||| | ||||||||
Sbjct 147 TGGCCAGGGTGAAGCGACGGTAAGACGTCGTGGAGGCCCGAACCCACTTAGGTTGAAAAC 206
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| ||||||||||||||||||||||||||||||| || |||||| | ||||||||||||
Sbjct 207 TGAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCTGTGATAGCTGGTTCT 266
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC-GGGGGTAGAGC-ACTGTTA 237
| |||||| |||||||| || | || | | || |||||||| |||| |
Sbjct 267 CCCCGAAATGCATTTAGGTGCAGCGTTGCGTGGTTCTTGCTGGAGGTAGAGCTACTG-GA 325
Query 238 TGGCTAGGGGGTCATTGCGACTTACCAA--ACCATTGCAAACTCCGAATGCGCATCAGTT 295
||||| ||| | | || |||| | | | | ||||||||||||| ||||
Sbjct 326 TGGCTGATGGGCCCTACCGGGTTACTGACGTCAACT--AAACTCCGAATGCCAGTCAGGG 383
Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| | || || |||||| |||| | |||| | | | ||||||| || | || ||
Sbjct 384 TGAGCGTGGCAGTGAGACAGTGGGGGATAAGCTTCATTGTCGAGAGGGAAACAGCCCAGA 443
Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415
| |||| |||||||||| || | ||||||| | || || || |||| ||||
Sbjct 444 CCATCAACTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTTCAGTTGCGAAGA 501
Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475
|| | |||| |||||||| |||||||||| || || ||||||||||||| |||||||| |
Sbjct 502 CAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTGAAAGAGTGCGTAATAGCTCACTGG 560
Query 476 TCGAG 480
|| ||
Sbjct 561 TCAAG 565
>seq201740
Length=8247
Score = 219 bits (242), Expect = 1e-54
Identities = 370/520 (71%), Gaps = 17/520 (3%)
Strand=Plus/Minus
Query 32 GTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTG 91
||||||||||||||| |||||||| ||||| |||| ||||| | |||||| ||
Sbjct 2405 GTAGACCCGAAACCAGGTGATCTAGCCATGAGCAGGTTGAAGTTAATGTAACAGTTAATG 2346
Query 92 GAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGG 151
|||| ||||||| || |||||||| | |||||| ||||| ||| |||||||
Sbjct 2345 GAGGACCGAACCAACGTTCGTTGAAAAGACCGTGGATGACTTGTGGCTAGCGGTGAAATT 2286
Query 152 CTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGG--TAGTGCCTCAAG 209
| || | ||| |||| ||||||||||||| |||| | |||||| ||| | | ||
Sbjct 2285 CCAATCGAACCTGGAGATAGCTGGTTCTCCCCGATATAGTTTTAGGACTAGCGTCAGAAT 2226
Query 210 TATCACCATCGGGGGTAGAGCACTGTTATGGCT-AGGGGGTCATTGCGACTTACCAAA-- 266
|| | || || |||| ||| ||| ||| | | || || || ||| ||
Sbjct 2225 TAGTGCAAT-GGAGGTAAAGCTCTGA-ATGTATGATGGCCCCACCTCGGGGTACTGAATG 2168
Query 267 CCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGG-AGTGAGGGCATGGGTGCTAA 325
| ||| ||||| ||||||| ||| ||| | | || ||| || ||||||| |||
Sbjct 2167 CAATT--AAACTGCGAATGC-CATT-GTTACATATCTGGCAGTCAGTCTATGGGTGATAA 2112
Query 326 GGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTA 385
||||| || || |||| || | || || ||||||||||| ||| |||| | ||||
Sbjct 2111 GGTCCATGGACGTGAGGGAAACAGCCCAGATCATCAGCTAAGGTCCCCAAATCAATGCTA 2052
Query 386 AGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCAT 445
||| || ||||| || |||| | |||||||||||| |||||||| |||||||||||
Sbjct 2051 AGTGGAA--AACGATGTGGAATTGTTCAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCAT 1994
Query 446 TCATTTAAAGAGTGCGTAACAGCTCACTAGTCG-AGGAGTCGGGCGTGGATAATAATCGG 504
| |||||||||||||||||||||||||||||| | || || ||| ||| ||| | |
Sbjct 1993 CC-TTTAAAGAGTGCGTAACAGCTCACTAGTCGAATGATTC-TGCGCGGAAAATGTACCG 1936
Query 505 GTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG 544
| |||| | ||||||||| |||| || ||||||
Sbjct 1935 GGGCTAAGCATTGTACCGAAGCTATGGGTCTATATATATG 1896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1686144497664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |