Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24]
204,516 sequences; 514,506,549 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq35330 206 5e-51
seq73030 140 6e-31
seq201740 134 3e-29
>seq35330
Length=4946
Score = 206 bits (228), Expect = 5e-51
Identities = 194/244 (80%), Gaps = 10/244 (4%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| |||||||||||||||| | ||||||||||||||||| || |||||||
Sbjct 559 AGAGCATTTGGTGGATGCCTTGGCACTAGAAGGCGATGAAGGACGTAATACGCTGCGATA 500
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| |||||||| || || | ||||||||||| ||||||||||||||||||||||
Sbjct 499 AGCTTCGGGGAGTT-GCGAATAAACTTTGATCCGAAGATTTCCGAATGGGGAAACCCA-- 443
Query 121 CCT------TTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAAC 174
||| || ||| |||| || ||||||||||| ||| | || ||| | ||||||
Sbjct 442 CCTAATTTATTAGGT-ATTGTATAGTGAATACATAGCTATATGAGGCAAACCCAGCGAAC 384
Query 175 TGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAG 234
||||| ||||||||||||| |||||| || ||||||||||| ||| ||||||| ||||
Sbjct 383 TGAAATATCTAAGTAGCTGGAGGAAAGGACATCAACCGAGACTCCGTTAGTAGTGACGAG 324
Query 235 CGAA 238
||||
Sbjct 323 CGAA 320
>seq73030
Length=1019
Score = 140 bits (154), Expect = 6e-31
Identities = 190/260 (73%), Gaps = 10/260 (4%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTAC-AGGCGATGAAGGACGTAGTAGCTTGCGAT 59
|| || |||||||||||||||||| || | || ||||||||||||| | | ||||||
Sbjct 536 AGAGCGCATGGTGGATGCCTTGGC-ATCAGGAGCCGATGAAGGACGTGGAAATCTGCGAT 594
Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119
|||| ||||||| | || | | |||||||| | | ||||||||||||||||| |
Sbjct 595 AAGCCTCGGGGAGCCGGTAAGCGGGCGTTGATCCGAGGGTGTCCGAATGGGGAAACCCCG 654
Query 120 CCCTTTGGGTCATTG------CATG-CTGAATACATAGGTA-TGCAAAGCGAACGCGGCG 171
|| | | | || | || |||||| ||||| || | |||||||| |
Sbjct 655 CCACTCGTGAGGGTGGTGACCCGTGTCTGAATGTATAGGGCGTGTGGGGGGAACGCGGGG 714
Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGC 231
|| |||||||||| |||| | ||||||| ||||| ||| |||||| |||||||||
Sbjct 715 AAGTGAAACATCTCAGTACCCGCAGGAAGAGAAAATAACAATGATTCCGGCAGTAGTGGC 774
Query 232 GAGCGAAATGGGATGAGCCT 251
|||||||| ||||||||||
Sbjct 775 GAGCGAAACTGGATGAGCCT 794
>seq201740
Length=8247
Score = 134 bits (148), Expect = 3e-29
Identities = 184/252 (73%), Gaps = 9/252 (4%)
Strand=Plus/Minus
Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67
|||||||||||||||| | || |||||||||||| | | ||||||||||| ||
Sbjct 3104 ATGGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCG 3045
Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC-GGCCCTTT- 125
||||| | ||| | |||||||||| |||| ||||||||||||||||| ||||
Sbjct 3044 GGGAG-CTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTTTA 2986
Query 126 ---GGGT--CATTGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCGAACTGAAA 179
| | | || | ||||| ||||| | |||| || || || | ||| |||||
Sbjct 2985 ATCAGATAGTACTGTACAATGAATTCATAGTTGTGCAGAGTGATACCTAGAGAATTGAAA 2926
Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239
||||| |||| || ||||||||||| | | | ||||||| ||||| |||||||||||
Sbjct 2925 CATCTTAGTACCTAGAGGAAAAGAAAGCGAATGCGATTCCCTTAGTAGCGGCGAGCGAAA 2866
Query 240 TGGGATGAGCCT 251
|||| |||||
Sbjct 2865 AGGGAGCAGCCT 2854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 916521725056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |