Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12457 145 2e-32 seq77039 116 1e-23 seq106205 113 1e-22 seq48669 113 1e-22 seq105304 111 5e-22 seq45891 109 2e-21 seq155243 107 6e-21 seq5709 107 6e-21 seq138560 102 3e-19 seq95749 100 9e-19 seq193809 98.7 3e-18 seq89965 98.7 3e-18 seq136169 91.5 5e-16 seq42366 91.5 5e-16 seq125131 87.8 6e-15 seq4825 87.8 6e-15 seq112005 86.0 2e-14 seq87140 84.2 7e-14 seq159468 78.8 3e-12 seq188672 77.0 1e-11 seq96829 77.0 1e-11 >seq12457 Length=2218 Score = 145 bits (160), Expect = 2e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||| ||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||| Sbjct 723 AAGAAAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGATGAATCTCTTCACGTTGAC 782 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 |||||||||||||||||||||| ||||||| |||||| || Sbjct 783 ATTCAGAGCACTGGGCAGAAATGACATTGCATCAACACCA 822 >seq77039 Length=2498 Score = 116 bits (128), Expect = 1e-23 Identities = 67/69 (97%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1936 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAGTAACTAGATGACGAGGC 1995 Query 424 ATTTGGCTA 432 ||||||||| Sbjct 1996 ATTTGGCTA 2004 >seq106205 Length=1187 Score = 113 bits (124), Expect = 1e-22 Identities = 62/62 (100%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 60 Query 431 TA 432 || Sbjct 61 TA 62 >seq48669 Length=5389 Score = 113 bits (124), Expect = 1e-22 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||| ||| |||||||||||| ||||| ||||| ||||||| || || Sbjct 85 AAGAGAGTCATAGTTTCTCTCGCCGTTTACCCACGCTTTAATGAATCTCTTCACGTTTAC 26 Query 497 ATTCAGAGCACTGGGCAGAAATCAC 521 ||||||||||||||||||||||||| Sbjct 25 ATTCAGAGCACTGGGCAGAAATCAC 1 >seq105304 Length=7546 Score = 111 bits (122), Expect = 5e-22 Identities = 61/61 (100%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5850 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 5791 Query 432 A 432 | Sbjct 5790 A 5790 >seq45891 Length=4252 Score = 109 bits (120), Expect = 2e-21 Identities = 75/81 (93%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 359 AGTAGATAGGG-ACAGTGGGAATCTCGTT-AATCCATTCAT-GCGCGTCACTAATTAGAT 415 ||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||| ||||| Sbjct 2175 AGTAGATAGGGGACAGTGGGAATCTCGTTGAATCCATGCATTGCGCGTCACTAAGTAGAT 2116 Query 416 GACGAGGCATTTGGCTACCTT 436 ||||||||||||||||| ||| Sbjct 2115 GACGAGGCATTTGGCTAACTT 2095 >seq155243 Length=2374 Score = 107 bits (118), Expect = 6e-21 Identities = 64/67 (96%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1688 ACAGTGGGAATCTCGTTAATTCAATCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 1747 Query 430 CTACCTT 436 ||| ||| Sbjct 1748 CTAACTT 1754 >seq5709 Length=2700 Score = 107 bits (118), Expect = 6e-21 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||| ||||||| |||| ||||||||||||||||||||| | ||||| ||||||| ||||| Sbjct 231 AAGGGAGTCATTGTTATTCCCGCCGTTTACCCGCGCTTTGATGAATCTCTTCACGTTGAC 172 Query 497 ATTCAGAGCACTGGGCAGA 515 ||| ||||||||||||||| Sbjct 171 ATTTAGAGCACTGGGCAGA 153 >seq138560 Length=2154 Score = 102 bits (112), Expect = 3e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||| ||||||| ||||| | || || ||||||| ||||| Sbjct 712 AAGAGAGTCATAGTTACTCCCGCCATTTACCCACGCTTTGATGGATCTCTTCACGTTGAC 653 Query 497 ATTCAGAGCACTGGGCAGAAATCACA 522 | |||||||||||||||| | |||| Sbjct 652 A-TCAGAGCACTGGGCAGTACCCACA 628 >seq95749 Length=5145 Score = 100 bits (110), Expect = 9e-19 Identities = 57/58 (98%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 540 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACAAGGCATTTGGCT 597 >seq193809 Length=4741 Score = 98.7 bits (108), Expect = 3e-18 Identities = 83/97 (86%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||| || |||||| ||||||||||||||||| | | | | ||||||| |||| Sbjct 1312 AAGAGAGTG-TA-TTACTC--GCCGTTTACCCGCGCTTTGATAATTGTCTTCACGTTGA- 1258 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| |||| |||||||| Sbjct 1257 ATTCAGAGCACTGGGCAGAAATCGCATTACGTCAACA 1221 >seq89965 Length=2191 Score = 98.7 bits (108), Expect = 3e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1342 CAGCGGCAATCTCGTTAATCCATTCATGCCCGTCACTAATTAGATGACGAGGCATTTGGC 1283 Query 431 TA 432 || Sbjct 1282 TA 1281 >seq136169 Length=5299 Score = 91.5 bits (100), Expect = 5e-16 Identities = 79/93 (85%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACT--CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT-TT 493 ||| ||||| |||||||| | |||||||||||| ||||| | ||||| ||||||| || Sbjct 1981 AAGCGAGTCGTAGTTACTTACACGCCGTTTACCC-CGCTTTGATGAATCTCTTCACAGTT 2039 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGC 526 ||| | |||||||||||||||||||||| |||| Sbjct 2040 GACTTACAGAGCACTGGGCAGAAATCAC-TTGC 2071 >seq42366 Length=2426 Score = 91.5 bits (100), Expect = 5e-16 Identities = 81/95 (85%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAG--CCCGTTCCCTTGGCTGTGGT-TTCGCTAGA 357 || ||||||||||||||||| ||||| |||||||||||||||||| | ||||||||| Sbjct 1236 GTATTCTTTCCCCGCTGATTTTTCCAAGGTCCCGTTCCCTTGGCTGTGTTATTCGCTAGA 1177 Query 358 TAGTAGAT-AGGGACAGTGGG-AATCTCGTTAATC 390 |||| ||| ||| ||| |||| ||| ||||||||| Sbjct 1176 TAGT-GATCAGGCACAATGGGTAATATCGTTAATC 1143 >seq125131 Length=3514 Score = 87.8 bits (96), Expect = 6e-15 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 || ||| | | |||| ||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 2483 AGTGACTGGGAGAATTTCGTTAATCCATTCACGCGCGTAACTAATTAGATGACGAGGCAT 2542 Query 426 TTGGCT 431 |||||| Sbjct 2543 TTGGCT 2548 >seq4825 Length=2526 Score = 87.8 bits (96), Expect = 6e-15 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 |||||||||||||||||||||||||||||||| | ||||| ||||||| | ||||| Sbjct 789 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCCGTGATGAATCTCTTCACGTGCGCATTC 848 Query 501 AGAGCACTGGGCA 513 |||||| |||||| Sbjct 849 AGAGCATTGGGCA 861 >seq112005 Length=1147 Score = 86.0 bits (94), Expect = 2e-14 Identities = 67/81 (83%), Gaps = 7/81 (9%) Strand=Plus/Plus Query 274 AGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGT 333 |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| Sbjct 1074 AGTCGGACTAGAGTGAAGCTCAACAGGGTCTTCTTTCCCGGCTGATTTTTCCAAG----- 1128 Query 334 TCCCTTGGCTGTGGTTTCGCT 354 |||| ||||||||||||| Sbjct 1129 --CCTTAACTGTGGTTTCGCT 1147 >seq87140 Length=3774 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1156 GTTAATCCATTCATGCACGTCACTAATTAGATGACGAGGCATTTGGCTA 1108 >seq159468 Length=3556 Score = 78.8 bits (86), Expect = 3e-12 Identities = 54/61 (89%), Gaps = 4/61 (7%) Strand=Plus/Plus Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||||||||||||| ||||||||| |||||||||||||| |||||| |||||||| Sbjct 1774 CAGTGGGAATCTCGTT----CATTCATGCACGTCACTAATTAGAGGACGAGCCATTTGGC 1829 Query 431 T 431 | Sbjct 1830 T 1830 >seq188672 Length=8705 Score = 77.0 bits (84), Expect = 1e-11 Identities = 55/63 (87%), Gaps = 3/63 (5%) Strand=Plus/Minus Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 ||||||| |||||| | ||||||||||||| ||||||||| ||||| ||||||||||| Sbjct 396 ACAGTGGAAATCTCCTCAATCCATTCATGCACGTCACTAACTAGAT---GAGGCATTTGG 340 Query 430 CTA 432 ||| Sbjct 339 CTA 337 >seq96829 Length=1121 Score = 77.0 bits (84), Expect = 1e-11 Identities = 71/90 (79%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 26 TTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCC 85 |||||| ||| |||| | |||| ||||||||||| || ||| |||||||| || | Sbjct 673 TTCTGTCCTCGCTGAGCTCGCCTTCGGACACCTGCGCTACCATTTGACAGATGTACCACT 614 Query 86 CCAGCCAAACTCCCCACCTGACAATGTCAT 115 |||| |||||||||| ||||||| ||| || Sbjct 613 CCAGTCAAACTCCCCGCCTGACACTGTTAT 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1631855754368