Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq55454 304 4e-80 seq140340 104 7e-20 >seq55454 Length=9146 Score = 304 bits (336), Expect = 4e-80 Identities = 221/255 (87%), Gaps = 1/255 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||| ||||||| | || |||||||| || |||| ||||| | ||||||||| Sbjct 8793 GTACTCATTTCAATTACGGGGCCTCAAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 8852 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8853 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8912 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| Sbjct 8913 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTAACAACCATGGT 8972 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| ||| | |||||||| Sbjct 8973 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGAAACGTCGCCGGC 9032 Query 240 TCAAGGCCATGCGAT 254 || |||| |||||| Sbjct 9033 TCGTGGCCGTGCGAT 9047 >seq140340 Length=11353 Score = 104 bits (114), Expect = 7e-20 Identities = 72/79 (91%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 62 CCCGTGTC-GGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT-GGTAGCCGT 119 |||||| | |||| ||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 1456 CCCGTGGCCGGGAGTGGGTAATTTGCGCGCCTGGCGCCTTCCTTGGATGTCGGTAGCCGT 1515 Query 120 TTCTCAGGCTCCCTCTCCG 138 |||||||||||||||| || Sbjct 1516 TTCTCAGGCTCCCTCTTCG 1534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507310990336