Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq35608 131 4e-26 >seq35608 Length=1089 Score = 131 bits (144), Expect = 4e-26 Identities = 176/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 22531 CGATCGCGTAGTCCGCTTCGGCCTGGGTGAACTTCTCTCCCGCGTCAGAGGTGAGCTGAT 22590 ||||||||||||| || | | |||||||| ||| || || |||||||||| Sbjct 1084 CGATCGCGTAGTCGGCCTGTGAGGTGGTGAACTGCTCGCCGTACTCGCTCGTGAGCTGAT 1025 Query 22591 CGTGGATCGCTGCGGGTGACATGCTCATGGTCG-CCTGGTACTGCTTGGCGGTCGCCAGA 22649 ||||||| || ||| |||||| ||| ||| ||||||| | || || |||| Sbjct 1024 CGTGGATGGCGTTGGGCGACATGGCCATA-TCGTCCTGGTAGGTCCGAGCCTTCTCCAGT 966 Query 22650 GCGTTCGCGTTCCAGTCGGCCTGCACGTTGTCGATGGCGTACTGCGCGGCATCAGCGGTG 22709 || || | |||||||||||||| |||||||||||||||||||| ||||| || || | | Sbjct 965 GCATTTTCATTCCAGTCGGCCTGGACGTTGTCGATGGCGTACTGAGCGGCCTCGGCCGAG 906 Query 22710 AACTTCTCCCCAGCGTCCGC-GGTGAGCTGGTCATAAACGCCCTGCTTCGACATGTGCAT 22768 || | ||| || | | ||| ||| ||||| || || | ||||||||| ||||||||| Sbjct 905 AAGTCCTCACC-GTATTCGCTGGTCAGCTGATCGTAGATGCCCTGCTTGCTCATGTGCAT 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121410022432936