Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_032409.1 Length=6589 Score E Sequences producing significant alignments: (Bits) Value seq185783 113 2e-21 >seq185783 Length=1760 Score = 113 bits (124), Expect = 2e-21 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 1941 TCCTTTATTTACATGCCTGATCAAGACAAAGTTTACTATTGGGATGGCCAGGAAGGGGGA 2000 || |||||||| | || || ||| | ||||||| |||||||| || | || ||| Sbjct 373 TCGTTTATTTATGTCCCGGACGCAGATGAGGTTTACTCATGGGATGGGCAACAGGGAGGA 432 Query 2001 ATAGAAGGATTAAATCAAGACACATGGGTGTATGTGTACACACATCAGATCAAAGTGTGT 2060 || ||||| |||| |||||||||||||||| |||| || |||||||||||||| Sbjct 433 ATCGAAGGTCTAAACCAAGACACATGGGTGTTGACTTACATCCACCAGATCAAAGTGTGC 492 Query 2061 TTGGAGAGGTACCCCTACCCCTACCACATTCTCTGTAAAGGGGATGATCT 2110 ||||| |||| ||||| ||| |||| ||||| || || |||||||| Sbjct 493 ATGGAGGATCACCCTTACCCATACTACATACTCTGCAAGGGAGATGATCT 542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20921353039472