Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_033701.1 Length=11743 Score E Sequences producing significant alignments: (Bits) Value seq36615 86.0 5e-13 >seq36615 Length=1239 Score = 86.0 bits (94), Expect = 5e-13 Identities = 176/262 (67%), Gaps = 10/262 (4%) Strand=Plus/Plus Query 6783 GTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTTTTGTACCTTTGTTCTCAGGTTT 6842 ||||||||| ||| || |||| || || || ||| || || | |||||||| || Sbjct 115 GTACTTTGTTACAACAAAACACTTCATCAAGGAGCTTTACGTTCCCCTATTCTCAGGGTT 174 Query 6843 AACAATGGCCGACGATTACAATTCAGTAATTAAGAAAATGTTGGACCGGGCGA-----CA 6897 ||||||||||| ||| || ||| | |||||| | | ||| ||| || Sbjct 175 GACAATGGCCGATGATCTCACAAAAGTGACCAAGAAACTCCTCGACAACTCGATCAACCA 234 Query 6898 GGTCAAGGTGAATCTGATTACCAGTATATAACATTTGCAAATCATTTTGACTATTCGAAA 6957 || | |||| |||||||| | || | | || || ||| ||||||| |||| Sbjct 235 GGGCCAGGT-----TGATTACCGTTCCATTTCTCTAGCCAACCATGTTGACTACGAGAAA 289 Query 6958 TGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTCCTTGTCATGGGTAAATTT 7017 ||||||||| |||| ||| || || |||||||| |||||| |||| || || || Sbjct 290 TGGAACAATCATCAAAGAGTGGAAGCAAATGACCCTGTCTTCACCATCATTGGGAAGGTT 349 Query 7018 TTAGGACTACCGAAACTCTTTG 7039 || || || || || |||||| Sbjct 350 TTTGGTCTCCCAAATGTCTTTG 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37376206322768