Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq165536 77.0 2e-12 >seq165536 Length=484117 Score = 77.0 bits (84), Expect = 2e-12 Identities = 94/125 (75%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||| ||| | ||||| || || Sbjct 145704 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTAATTTTACCGTGGTTGGCTGCC 145763 Query 75 TCCCGAAGGTTAAGCT-ACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGT 133 || | ||| |||| ||| |||| | |||| |||||||||| ||||||||| || Sbjct 145764 TCTTG--CGTT-AGCTCACCACCTTCAGGTAAAACCAACTCCCATGGCGTGACGGGCAGT 145820 Query 134 GTGTA 138 ||||| Sbjct 145821 GTGTA 145825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344402845920