Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq97131 71.6 8e-11 >seq97131 Length=32657 Score = 71.6 bits (78), Expect = 8e-11 Identities = 84/111 (76%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGA-TAACATCGCC 59 ||||||||| |||||| |||| | ||| |||| ||||||| ||| |||| | | Sbjct 12688 GAACCCAAATACTTTGGTTTCCAGGAAGCTGCCCGCCGAGTCATT-TGAGTAACTCAGGC 12630 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||| || || ||||| ||||| ||||| |||| | ||||||||||||| Sbjct 12629 GGATCGCTGGTTGGCATCGTTTATGGTTATAACTAGGGCGGTATCTGATCG 12579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277435625880