Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq360092 522 1e-145
seq14242 141 4e-31
seq362366 131 7e-28
seq113379 129 2e-27
seq88502 127 8e-27
seq254821 120 1e-24
seq143325 120 1e-24
seq61064 113 2e-22
seq360438 109 2e-21
seq363558 104 1e-19
seq180743 100 1e-18
seq67505 100 1e-18
seq260778 87.8 7e-15
seq180275 80.6 1e-12
seq142695 80.6 1e-12
seq136126 78.8 4e-12
>seq360092
Length=1112
Score = 522 bits (578), Expect = 1e-145
Identities = 413/489 (84%), Gaps = 10/489 (2%)
Strand=Plus/Minus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct 503 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 444
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 443 GGAGGTAAACCCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGT 384
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 383 GATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAG 324
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACT 252
|||||||||||| ||||||||||| | | | ||||||| | | | | ||| |||||
Sbjct 323 GGAAGCGCTTGCGACCAGACTTGCGCCCGTCGGATCAACCGTCGCTTGCGGCGGCGCACT 264
Query 253 CTTCTGCGG--TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGG 310
| | |||| ||||||||||||||| ||| ||| ||| |||||| |||||||||||
Sbjct 263 C--CGGCGGGCTCAGGCCAGCATCAGTTCGTCCGGGGGGAGAAAGGCGGCGGGAATGTGG 206
Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370
| |||| || ||||||||||||| ||| ||| | | || |||||||||| ||||
Sbjct 205 --CTCTTC--GGAGTGTTATAGCCCGCCGTGTAATAC-CCTCGGGTGGACTGAGGACCGC 151
Query 371 GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430
|| || ||||||||||||||||||| || |||| ||||||||| |||||||||||||
Sbjct 150 GCGTATGCAAGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTTGAAACACGGACCAAG 91
Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490
||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 90 GAGTCGTCCTAATATGCGAGTGTACGGGTGTCAAACCCCTGCGCGTAATGAAAGTGAACG 31
Query 491 GAGGTGGGA 499
|||||| ||
Sbjct 30 GAGGTGAGA 22
>seq14242
Length=8668
Score = 141 bits (156), Expect = 4e-31
Identities = 119/146 (82%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| | |||||| | || ||||||||||| | |||||||||||||||
Sbjct 5341 GAGTCGTGTTGCTTGATAGTGCAGCACAAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 5400
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| | ||||||||||||| ||||||| |||| ||||| ||||||||||| || |
Sbjct 5401 ATCACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 5460
Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185
||||||| |||||| |||||||| ||
Sbjct 5461 AGAGAGTCAAAAAGTACGTGAAACTG 5486
Score = 134 bits (148), Expect = 6e-29
Identities = 100/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
|| |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| ||
Sbjct 6063 TGTGACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATG 6122
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| || ||| |||||| ||||||||||||| |||| | ||||| ||||||||||
Sbjct 6123 GAGGACCGAAGCAGTTCTGACGTGCAAATCGATTGTCAGAATTGGGCATAGGGGCGA 6179
>seq362366
Length=1041
Score = 131 bits (144), Expect = 7e-28
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||||
Sbjct 677 GTTGGCACCCGAAAGATGGTGAACTATGCCCGGGCAGGATGAGGCCAGAGGAAACTCTGG 618
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||| || |||| ||||| ||||||||||||||||| | |||||||||||
Sbjct 617 TGGAGGTCCGAAGCGCTTCTGACGTGCAAATCGATCGTCCGACCCAGGTATAGGGGC 561
>seq113379
Length=1079
Score = 129 bits (142), Expect = 2e-27
Identities = 100/119 (84%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||| |||||||||||||||||||||||| | ||| || |||||||||||||||||
Sbjct 215 GTTGGCACCCGAAAGATGGTGAACTATGCCCGGGCAGGACGAGGCCAGAGGAAACTCTGG 156
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| || |||| ||||| ||||||||||||||||| | |||||||||||||
Sbjct 155 TGGAGGTCCGAAGCGCTTCTGACGTGCAAATCGATCGTCCGACCCAGGTATAGGGGCGA 97
>seq88502
Length=1324
Score = 127 bits (140), Expect = 8e-27
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| |||||||
Sbjct 208 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAATTGGGTGGTAAACTCCATCTAAGGCTAAAT 149
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| | |||||||||||| |||||||| |||| ||||| ||||||| |||||| |
Sbjct 148 ACGTCCGAGAGACCGATAGTTCACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 89
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || ||||||||
Sbjct 88 AGAGAGTTCAAGAGTACGTGAAA 66
>seq254821
Length=1148
Score = 120 bits (132), Expect = 1e-24
Identities = 98/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||| |||||||||||||||||||| ||| | ||| || |||||||||||||||||
Sbjct 1030 GTTGGCACCCGAAAGATGGTGAACTAAGCCCGGGCAGGACGAGGCCAGAGGAAACTCTGG 971
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| || |||| ||||| |||| |||||||||||| | |||||||||||||
Sbjct 970 TGGAGGTCCGAAGCGCTTCTGACGTGAAAATCGATCGTCCGACCCAGGTATAGGGGCGA 912
>seq143325
Length=6507
Score = 120 bits (132), Expect = 1e-24
Identities = 98/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||| |||||||||||||||||||||||| | ||| || ||||||||||||||||
Sbjct 6134 GTTGGCACCCGAAAGATGGTGAACTATGCCCGGGCAGGACGAGGCCAGAGGAAACTCTGC 6193
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| || ||| ||||| ||||||||||||||||| | |||||||||||||
Sbjct 6194 TGGAGGTCCGAAGCCCTTCTGACGTGCAAATCGATCGTCCGACCGAGGTATAGGGGCGA 6252
>seq61064
Length=7892
Score = 113 bits (124), Expect = 2e-22
Identities = 83/97 (86%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
|||| |||||||||||||||||||||||| | ||| || |||||||||||||||||
Sbjct 2385 GTTGACACCCGAAAGATGGTGAACTATGCCCGGGCAGGACGAGGCCAGAGGAAACTCTGG 2444
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCG 661
||||||| || |||| ||||| ||||||||||||||
Sbjct 2445 TGGAGGCCCGAAGCGCTTCTGATGTGCAAATCGATCG 2481
>seq360438
Length=1420
Score = 109 bits (120), Expect = 2e-21
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
|||||| | ||||| ||||||||||||||||| |||||| | | | || ||||||
Sbjct 1104 AGAGCACATACGTTGGCACCCGAAAGATGGTGAATTATGCCCGGGCAAGACGAGGCCAGA 1163
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
||||||||| ||||||| || |||| ||||| ||||||||||||||||| | |||
Sbjct 1164 GGAAACTCTCGTGGAGGTCCGAAGCGCTTCTGACGTGCAAATCGATCGTCCGACCCAGGT 1223
Query 674 ATAGGGGC 681
||||| ||
Sbjct 1224 ATAGGTGC 1231
>seq363558
Length=1084
Score = 104 bits (114), Expect = 1e-19
Identities = 90/112 (80%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 71 TGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGA 130
|||| |||||| | | |||||||||||||| | |||||||||||| ||||||||
Sbjct 1 TGGGTGGTAAACTCCATCTAAAGCTAAATACGTCCGAGAGACCGATAGTTCACAAGTACC 60
Query 131 GTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182
|||| ||||| ||||||| |||||| | |||||||| || || ||||||||
Sbjct 61 GTGAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 112
>seq180743
Length=135097
Score = 100 bits (110), Expect = 1e-18
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
|||| |||||||||||||| ||||||||| | ||| || |||||||||||||||||
Sbjct 101902 GTTGCCACCCGAAAGATGGTAAACTATGCCCGGGAAGGACGAGGCCAGAGGAAACTCTGG 101961
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662
||||| || |||| ||| |||||| |||||||||||
Sbjct 101962 CGGAGGTCCGAAGCGCTTCCGGCGTGTAAATCGATCGT 101999
>seq67505
Length=17677
Score = 100 bits (110), Expect = 1e-18
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|||| || |||| |||||||| ||||||| | ||| || |||||| |||||||||||
Sbjct 4203 TTGGCACACGAATGATGGTGAGCTATGCCCGGGCAGGACGAGGCCAGACGAAACTCTGGT 4144
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| || |||| || || |||||||||||||| || | |||||||||||||
Sbjct 4143 GGAGGTCCGAAGCGCTTGTGACGTGCAAATCGATCATCCCACCCAGGTATAGGGGCGA 4086
>seq260778
Length=16343
Score = 87.8 bits (96), Expect = 7e-15
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| ||| ||| || |||||| ||| |||| |||||| | | ||||| |||||||
Sbjct 15506 GAGTCGGGTTTCTTGAGAGTGCAGCCTTAATTGGGTGGTAAACTCCATCTAAGGCTAAAT 15447
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| | |||||||||||| || ||||| ||| || | ||||| |||||| |
Sbjct 15446 ACGTCCGAGAGACCGATAGTTCAAAAGTACCTTGAAGAAACGTCTAAAAGAACTTTGAAG 15387
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || |||| |||
Sbjct 15386 AGAGAGTTCAAGAGTACGTAAAA 15364
Score = 82.4 bits (90), Expect = 3e-13
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
||| ||||||||| |||||||||| || |||| | || ||| ||| || ||| ||||
Sbjct 14227 ACCTGAAAGATGGAGAACTATGCCCGAGTAGGACTAGGCTAGATAAAATTCCGGTTGAGG 14168
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||| |||| ||||||||||||||||| |||||||||||||
Sbjct 14167 TTCGATGCGCGTCTGACGTGCAAATCGATCGTCCGTCCCAGGTATAGGGGCGA 14115
>seq180275
Length=1049
Score = 80.6 bits (88), Expect = 1e-12
Identities = 62/74 (84%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669
||||||||||||| ||||||| || |||| ||||| ||||||||||||||||| |
Sbjct 1049 CAGAGGAAACTCTTGTGGAGGTCCGAAGCGCTTCTGACGTGCAAATCGATCGTCCGACCC 990
Query 670 GGGTATAGGGGCGA 683
|||||||||||||
Sbjct 989 AGGTATAGGGGCGA 976
>seq142695
Length=8751
Score = 80.6 bits (88), Expect = 1e-12
Identities = 90/119 (76%), Gaps = 1/119 (1%)
Strand=Plus/Plus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|||| ||||||||||||| | |||||||| | ||| || || |||||| ||||||
Sbjct 5005 TTGGCACCCGAAAGATGGCGGACTATGCCCGGGCAGGACGAGGCGAGAGGATGCTCTGGC 5064
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATC-GATCGTCAAATTTGGGTATAGGGGCGA 683
||||| || |||| |||| |||||||||| |||||| | |||| ||||||||
Sbjct 5065 GGAGGTCCGAAGCGCTTCTTACGTGCAAATCAGATCGTACGACCCAGGTACAGGGGCGA 5123
>seq136126
Length=9026
Score = 78.8 bits (86), Expect = 4e-12
Identities = 75/96 (78%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||| |||||||| | ||||||||||| |||||||| |||| |||| ||||
Sbjct 8169 TCTAAGGCTAAATACGTCCGAGAGACCGATACGTCACAAGTACCGTGAGGGAAACTTGAA 8228
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182
||| |||||| | |||||||| || || ||||||||
Sbjct 8229 AAGAACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 8264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2072074396600
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