Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq165536 129 8e-28
>seq165536
Length=484117
Score = 129 bits (142), Expect = 8e-28
Identities = 178/245 (73%), Gaps = 17/245 (7%)
Strand=Plus/Plus
Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66
|||||| ||| ||||||||||||| || ||||| ||| || | | ||| ||| | |||
Sbjct 12952 CTTCCAGCACTGGGCAGGCGTCAGACCCTATACGTCGTCT-ATTGACTTTGCAGAGCCCT 13010
Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126
||||||||| |||||||||||| ||| ||| | ||| |||| || || |
Sbjct 13011 GTGTTTTTAATAAACAGTCGCTACCCCCTAGCTTGTGC------CACCTGCACA-----T 13059
Query 127 CGTTCACCAG---CAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTC 183
||| ||| ||| | || | |||| |||||||||| | || |||||| | |||
Sbjct 13060 GGTTGCCCATATACAG-GTCATCT-TTCTTCCGAAGTTACAGATGCAATTTGCCTAGTTC 13117
Query 184 CTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTA 243
||| | || |||| | | | |||||| |||| ||||||||| ||||||||||||||||
Sbjct 13118 CTTCAGCATCGTTCTCTCAAGCGCCTTGGTATACTCTACCTGTCCACCTGTGTCGGTTTT 13177
Query 244 CGGTA 248
||||
Sbjct 13178 GGGTA 13182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 691914427316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |