Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq165536 273 5e-71 >seq165536 Length=484117 Score = 273 bits (302), Expect = 5e-71 Identities = 281/369 (76%), Gaps = 20/369 (5%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||| | ||||| || | ||||||||| |||||||| Sbjct 12774 GCATCTTCACGGAGAATTCAATTTCGCTGAGTCGATACTGGAGACAGTGGGGAAATCGTT 12833 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 12834 ACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 12893 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||| |||||| ||| | |||| || |||| || ||| Sbjct 12894 TAGTTACGGCCGCCGTTCACTGGGACTTCAATTCA-------GA--GCTCGCACCCCTCC 12944 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||| ||||||||||||| ||||||| |||||| ||||| |||| Sbjct 12945 TTTTAATCTTCCAGCACTGGGCAGGCGTCAGACCCTATACGTCGTCTATTGACTTTGCAG 13004 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG---------- 296 | ||||||||||| |||||||||||| |||| | ||| |||| Sbjct 13005 AGCCCTGTGTTTTTAATAAACAGTCGCTACCCCCTAGCTTGTGCCACCTGCACATGGTTG 13064 Query 297 -TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACA 355 |||| ||||| | |||| || ||||||| | || |||||| |||||||| | Sbjct 13065 CCCATATACAGGTCATCTTTCTTCCGAAGTTACAGATGCAATTTGCCTAGTTCCTTCAGC 13124 Query 356 ATAGTTCTC 364 || |||||| Sbjct 13125 ATCGTTCTC 13133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1058474516992