Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq165536 432 1e-118
seq347912 89.7 2e-15
>seq165536
Length=484117
Score = 432 bits (478), Expect = 1e-118
Identities = 403/502 (80%), Gaps = 9/502 (2%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| || |||||||||||||||||||||| | |||||||||||||||||||
Sbjct 146331 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCTCGCACAAGCGGTGGAGCAT 146272
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
| |||||||||||| | ||||||| ||||||||||| |||||||| | | | |
Sbjct 146271 GCGGTTTAATTCGATGTTACGCGAAAAACCTTACCAACCCTTGACATGGTG-GTCGCGGA 146213
Query 121 TAG-AGATAGAGGTTTCCCCT--TCGGG-GGACAGAGTGACAGGTGATGCATGGTTGTCG 176
| | ||| | | |||| | |||| |||| | ||||||| |||| || |||||
Sbjct 146212 TTGCAGAGATACTTTTCTTCAGCTCGGCTGGACC-ACACACAGGTGTTGCACGGCTGTCG 146154
Query 177 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAG 236
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 146153 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATTCTTAT 146094
Query 237 TTGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGT 294
|||||| | ||| | ||| ||| |||| ||||| ||||| || || |||||||||
Sbjct 146093 TTGCCAGCGGGTAATGCCGGGAACTATAAGAAAACTGCTGGTGATAAGCCAGAGGAAGGT 146034
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||||||||||| |||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 146033 GGGGACGACGTCAAGTCATCATGGCCCTTACGGGTTGGGCTACACGCGTGCTACAATGGT 145974
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414
|||| |||| ||| | || |||| || |||||||||| |||| |||||||||
Sbjct 145973 GTTTACAGAGGGAAGCAAGACGGCGACGTGGAGCAAATCCC-TAAAAGACATCTCAGTTC 145915
Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474
||||||| |||||||||||| |||||| |||||||||||||||||| ||||||||
Sbjct 145914 GGATTGTTCTCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCA 145855
Query 475 TGCTACGGTGAATACGTTCCCG 496
||| |||||||||||||| ||
Sbjct 145854 TGCCGCGGTGAATACGTTCTCG 145833
>seq347912
Length=48280
Score = 89.7 bits (98), Expect = 2e-15
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 291 AGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAA 350
||||||||| ||||||| ||||||| | |||||| | |||||||||||||||||||||
Sbjct 40099 AGGTGGGGATGACGTCAGATCATCACGGCCCTTACGTCCTGGGCTACACACGTGCTACAA 40158
Query 351 TGGACAATACAAAGGGCAGCGAAACCGCGAGG 382
||| | |||| | || || || ||||||||
Sbjct 40159 TGGCAAGGACAATGAGCTGCCAACCCGCGAGG 40190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1498442840320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |