Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq165536 168 1e-39 >seq165536 Length=484117 Score = 168 bits (186), Expect = 1e-39 Identities = 167/215 (78%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||||||||||||||||||||||||||||||||| | | | | || Sbjct 12572 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGATGGTTAGCT 12513 Query 186 CAGCTTGGATGGAAACCATGCGC-ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 ||| |||| ||||| || | ||||||| |||| ||| | ||||||||| | Sbjct 12512 CAGGTTGGTCGGAAATCAACTTTTAGAGTGCAATGGCATAAGCTAGCCTGACTGCGAGTC 12453 Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 |||| | ||||| |||||||||||| | || |||||||| ||| | || ||||| || Sbjct 12452 TGACAAGACGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGAGTGGAAGGG 12393 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || |||||| ||| ||||||| ||| | ||||||| Sbjct 12392 CCATCGCTCAACGAATAAAAGGTACTCCGGGGATA 12358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 978770110592