Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq165536 168 1e-39
>seq165536
Length=484117
Score = 168 bits (186), Expect = 1e-39
Identities = 167/215 (78%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||| ||||||||||||||||||||||||||||||||||||||||||| | | | | ||
Sbjct 12572 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGATGGTTAGCT 12513
Query 186 CAGCTTGGATGGAAACCATGCGC-ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244
||| |||| ||||| || | ||||||| |||| ||| | ||||||||| |
Sbjct 12512 CAGGTTGGTCGGAAATCAACTTTTAGAGTGCAATGGCATAAGCTAGCCTGACTGCGAGTC 12453
Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304
|||| | ||||| |||||||||||| | || |||||||| ||| | || ||||| ||
Sbjct 12452 TGACAAGACGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGAGTGGAAGGG 12393
Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| |||||| ||| ||||||| ||| | |||||||
Sbjct 12392 CCATCGCTCAACGAATAAAAGGTACTCCGGGGATA 12358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 978770110592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |